RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 OR2A25A4D2G3 310 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 FITM1A5D6W6 292 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 MYO1CO00159 1063 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 AP3B1O00203 1094 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SORBS2O94875 1100 aaKnown RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 ATP5DP30049 168 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 PPARGP37231 505 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 EFNA3P52797 238 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 DCDP81605 110 aaKnown RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 CUL1Q13616 776 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 RAPSNQ13702 412 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 DHX34Q14147 1143 aaKnown RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 TMED2Q15363 201 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SF1Q15637 639 aaKnown RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 KLHL38Q2WGJ6 581 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 ZNF470Q6ECI4 717 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SUSD1Q6UWL2 747 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SDCCAG8Q86SQ7 713 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 GPR135Q8IZ08 494 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 METTL27Q8N6F8 245 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 OTUD6BQ8N6M0 293 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 RBMXL3Q8N7X1 1067 aaKnown RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 PPFIBP2Q8ND30 876 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 OR2Y1Q8NGV0 311 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 CD200R1Q8TD46 325 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SSC4DQ8WTU2 575 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 ASB11Q8WXH4 323 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 RAD51AP1Q96B01 352 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 C10orf90Q96M02 699 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 PANX3Q96QZ0 392 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SPSB2Q99619 263 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SLC25A23Q9BV35 468 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 ZBTB20Q9HC78 741 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 XAB2Q9HCS7 855 aaKnown RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 CTSFQ9UBX1 484 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 PYCARDQ9ULZ3 195 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 PTRH2Q9Y3E5 179 aaKnown RBP8.48□□□□□ -1.05
ATG4A-205ENST00000394892 AP1M2Q9Y6Q5 423 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 FAM169AQ9Y6X4 670 aa8.48□□□□□ -1.05
ATG4A-205ENST00000394892 SEC16AO15027 2179 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 MED13Q9UHV7 2174 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 A6NL46 340 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 E7ENX8 843 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 GFYI3L273 518 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 ALOX12BO75342 701 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 USP1O94782 785 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 SLC16A8O95907 504 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 HBQ1P09105 142 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 ERVK-10P10266 1014 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 CHRM3P20309 590 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 OTX2P32243 289 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 OR1D4P47884 311 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 UQCRFS1P47985 274 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 FNTAP49354 379 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 VSX2P58304 361 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 TAP2Q03519 686 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 PRTGQ2VWP7 1150 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 HSP90AA5PQ58FG0 334 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 WASHC2DQ5SRD0 308 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 RBM20Q5T481 1227 aaKnown RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 ZNF425Q6IV72 752 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 CASC4Q6P4E1 433 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 TLDC1Q6P9B6 456 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 SHISA6Q6ZSJ9 500 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 TTLL10Q6ZVT0 673 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 RNF44Q7L0R7 432 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 PIWIL4Q7Z3Z4 852 aaKnown RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 HOOK3Q86VS8 718 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 PAQR7Q86WK9 346 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 CREG2Q8IUH2 290 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 OR9A1PQ8NGU1 263 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 CPT1CQ8TCG5 803 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 PROKR1Q8TCW9 393 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 ZNF480Q8WV37 535 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 INPP5DQ92835 1189 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 PDLIM2Q96JY6 352 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 GPR21Q99679 349 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 SMAD5Q99717 465 aaKnown RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 DPH2Q9BQC3 489 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 DHRS4Q9BTZ2 278 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 ACAT2Q9BWD1 397 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 TSSK1BQ9BXA7 367 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 CUTCQ9NTM9 273 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 C20orf96Q9NUD7 363 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 INTS10Q9NVR2 710 aaKnown RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 CUEDC1Q9NWM3 386 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 LUZP4Q9P127 313 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 IFT80Q9P2H3 777 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 ADAMTS6Q9UKP5 1117 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 FBXO5Q9UKT4 447 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 SLC39A10Q9ULF5 831 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 G3BP2Q9UN86 482 aaKnown RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 SH2B3Q9UQQ2 575 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 DHRS7Q9Y394 339 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 LRRK2Q5S007 2527 aa8.47□□□□□ -1.05
ATG4A-205ENST00000394892 USP9XQ93008 2570 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-205ENST00000394892 FER1L5A0AVI2 2057 aa8.46□□□□□ -1.05
ATG4A-205ENST00000394892 PIKFYVEQ9Y2I7 2098 aa8.46□□□□□ -1.05
ATG4A-205ENST00000394892 A0A0J9YVX5 310 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms