RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 STK16O75716 305 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 FAM163BP0C2L3 166 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 HSD17B1P14061 328 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 CORO1AP31146 461 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 SRP54P61011 504 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 AQP6Q13520 282 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 PON2Q15165 354 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 XKR6Q5GH73 641 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 CHDHQ8NE62 594 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 ATL1Q8WXF7 558 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 OTUB1Q96FW1 271 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 RPRD1BQ9NQG5 326 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 PRR23AA6NEV1 266 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 AP2A2O94973 939 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 STSP08842 583 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 MAGEA12P43365 314 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 RPS14P62263 151 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF57Q68EA5 555 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 KLHL17Q6TDP4 642 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 CCBE1Q6UXH8 406 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 RRM2BQ7LG56 351 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 ADAMTSL2Q86TH1 951 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 SCAIQ8N9R8 606 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 LINC01599Q8WXQ3 324 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 NELL1Q92832 810 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 WDR37Q9Y2I8 494 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 GSAPA4D1B5 854 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 K7ERQ8 282 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 TBL1XO60907 577 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 ANXA5P08758 320 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 ENO2P09104 434 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 BMP4P12644 408 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 ENGP17813 658 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 DCTP40126 519 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 PTPN5P54829 565 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 TMBIM6P55061 237 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 ANKS3Q6ZW76 656 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 RBM23Q86U06 439 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 NLGN4XQ8N0W4 816 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 FAM83FQ8NEG4 500 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 SLC22A14Q9Y267 594 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 WBP11Q9Y2W2 641 aaKnown RBP12.89□□□□□ -0.35
NFKB1-202ENST00000394820 PCDHB14Q9Y5E9 798 aa12.89□□□□□ -0.35
NFKB1-202ENST00000394820 LDB2O43679 373 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 FHP07954 510 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 SLC10A3P09131 477 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 PABPC1P11940 636 aaKnown RBP12.88□□□□□ -0.35
NFKB1-202ENST00000394820 HRH2P25021 359 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 SLC6A4P31645 630 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 SLC26A3P40879 764 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-202ENST00000394820 SERINC3Q13530 473 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 CLCA4Q14CN2 919 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 TTLL9Q3SXZ7 439 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 UBE2R2Q712K3 238 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-202ENST00000394820 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 OR4K1Q8NGD4 311 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 KAT2AQ92830 837 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 IKZF5Q9H5V7 419 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 UCKL1Q9NWZ5 548 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 ADPRHL2Q9NX46 363 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 IL37Q9NZH6 218 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 PCDHGA4Q9Y5G9 962 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 VCANP13611 3396 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 A0A0G2JN53 185 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 TARM1B6A8C7 271 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 CLIC1O00299 241 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 INSIG1O15503 277 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 SUV39H1O43463 412 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 TULP3O75386 442 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 STATHP02808 62 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 FABP3P05413 133 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 FEN1P39748 380 aaKnown RBP12.88□□□□□ -0.35
NFKB1-202ENST00000394820 CTU2Q2VPK5 515 aaKnown RBP12.88□□□□□ -0.35
NFKB1-202ENST00000394820 PYDC2Q56P42 97 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 NADSYN1Q6IA69 706 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-202ENST00000394820 UMODL1-AS1Q8N2C9 162 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 TCAIMQ8N3R3 496 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 OR5K1Q8NHB7 308 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF599Q96NL3 588 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 TLR9Q9NR96 1032 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 TMEM248Q9NWD8 314 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 TUBA8Q9NY65 449 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-202ENST00000394820 GPR83Q9NYM4 423 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 DNMT3LQ9UJW3 386 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 NEU3Q9UQ49 428 aa12.88□□□□□ -0.35
NFKB1-202ENST00000394820 ZFC3H1O60293 1989 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms