RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PPCDCQ96CD2 204 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 MTFMTQ96DP5 389 aaKnown RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 HSH2DQ96JZ2 352 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 C11orf84Q9BUA3 381 aaPredicted RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 POLR2J2Q9GZM3 115 aaKnown RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 NAA50Q9GZZ1 169 aaKnown RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 SLC32A1Q9H598 525 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 SNX10Q9Y5X0 201 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 OAS3Q9Y6K5 1087 aaKnown RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 CLCA1A8K7I4 914 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 WASH4PA8MWX3 477 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 CDC7O00311 574 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 ALDH1A1P00352 501 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 ALDOCP09972 364 aaKnown RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 PIRTP0C851 137 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 SLC2A2P11168 524 aaPredicted RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 TACR2P21452 398 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 HTR1BP28222 390 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 GPC1P35052 558 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 RPL34P49207 117 aaKnown RBP8.41□□□□□ -1.06
GABRA1-202ENST00000393943 RPIAP49247 311 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 CDKN2DP55273 166 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 CDH12P55289 794 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 AP1S2P56377 157 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 NCS1P62166 190 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 PPP3R1P63098 170 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 VMACQ2NL98 169 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 NPWQ8N729 165 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 GOLGA2P5Q9HBQ8 144 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 ARL5AQ9Y689 179 aa8.41□□□□□ -1.06
GABRA1-202ENST00000393943 FOCADQ5VW36 1801 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 PPEF2O14830 753 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 PDPK1O15530 556 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 ITGA10O75578 1167 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 CAPNS1P04632 268 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 JUNP05412 331 aaKnown RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 ITGB1P05556 798 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 GSTM1P09488 218 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 SPAM1P38567 509 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 MAP2K4P45985 399 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 SLC10A7Q0GE19 358 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 DSC3Q14574 896 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 XKR6Q5GH73 641 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 C16orf62Q7Z3J2 963 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 OSTM1Q86WC4 334 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 FAM46DQ8NEK8 389 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 OR52E4Q8NGH9 312 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 OR13C4Q8NGS5 318 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 NDNFQ8TB73 568 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 DMRTB1Q96MA1 342 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 TRNT1Q96Q11 434 aaKnown RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 NEURL2Q9BR09 285 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 DUSP26Q9BV47 211 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 THG1LQ9NWX6 298 aaKnown RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 SLC25A13Q9UJS0 675 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF222Q9UK12 451 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 DHRS7Q9Y394 339 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 HCN4Q9Y3Q4 1203 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 PMF1-BGLAPU3KQ54 211 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 HCN1O60741 890 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 MYCLP1P12525 358 aaPredicted RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 ENGP17813 658 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 CFL1P23528 166 aaKnown RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 CLDN8P56748 225 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 SLC13A2Q13183 592 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 MAD2L1BPQ15013 274 aaPredicted RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 WSCD2Q2TBF2 565 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 PAGE3Q5JUK9 113 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 GNASQ5JWF2 1037 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 USP30Q70CQ3 517 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 USP51Q70EK9 711 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 SNX20Q7Z614 316 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 CDK20Q8IZL9 346 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 OR7G1Q8NGA0 311 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 CLHC1Q8NHS4 586 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 NR4A3Q92570 626 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 EMID1Q96A84 441 aaPredicted RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 EPYCQ99645 322 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 TP63Q9H3D4 680 aaPredicted RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 ZFYVE1Q9HBF4 777 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 WDR6Q9NNW5 1121 aaKnown RBP8.4□□□□□ -1.06
GABRA1-202ENST00000393943 ACOT13Q9NPJ3 140 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 SNTG1Q9NSN8 517 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 PFDN2Q9UHV9 154 aa8.4□□□□□ -1.06
GABRA1-202ENST00000393943 UGT2B17O75795 530 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 BMP4P12644 408 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 GRK4P32298 578 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 KDELR2P33947 212 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 CASP3P42574 277 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 NSG1P42857 185 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 PTPN5P54829 565 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 AP3S2P59780 193 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 ALDH6A1Q02252 535 aaKnown RBP8.4□□□□□ -1.07
GABRA1-202ENST00000393943 RAPSNQ13702 412 aa8.4□□□□□ -1.07
GABRA1-202ENST00000393943 TSTQ16762 297 aaKnown RBP8.4□□□□□ -1.07
GABRA1-202ENST00000393943 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.4□□□□□ -1.07
GABRA1-202ENST00000393943 RPS27LQ71UM5 84 aaKnown RBP8.4□□□□□ -1.07
GABRA1-202ENST00000393943 KRT78Q8N1N4 520 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms