RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IGHV4-34P06331 123 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 PCNAP12004 261 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 NPPBP16860 134 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 VARSP26640 1264 aaKnown RBP8.37□□□□□ -1.07
TDP1-203ENST00000393454 CCR5P51681 352 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 TAP2Q03519 686 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 EMX2Q04743 252 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 FRG2Q64ET8 278 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 CAPRIN2Q6IMN6 1127 aaKnown RBP8.37□□□□□ -1.07
TDP1-203ENST00000393454 C16orf89Q6UX73 402 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 HID1Q8IV36 788 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 TBC1D21Q8IYX1 336 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 DSELQ8IZU8 1212 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 RAB42Q8N4Z0 105 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 NEIL2Q969S2 332 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 BIRC7Q96CA5 298 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 SCARF2Q96GP6 870 aaPredicted RBP8.37□□□□□ -1.07
TDP1-203ENST00000393454 SLC45A3Q96JT2 553 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 FRG2BQ96QU4 278 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 SLC25A23Q9BV35 468 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 MMADHCQ9H3L0 296 aaPredicted RBP8.37□□□□□ -1.07
TDP1-203ENST00000393454 WSB2Q9NYS7 404 aaPredicted RBP8.37□□□□□ -1.07
TDP1-203ENST00000393454 GPRC5BQ9NZH0 403 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 NOP53Q9NZM5 478 aaKnown RBP8.37□□□□□ -1.07
TDP1-203ENST00000393454 BAIAP2L1Q9UHR4 511 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 EIF3LQ9Y262 564 aaKnown RBP8.37□□□□□ -1.07
TDP1-203ENST00000393454 INVSQ9Y283 1065 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 OR52A4PA6NMU1 304 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 ZNF839A8K0R7 811 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 ANGPT2O15123 496 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SLC22A3O75751 556 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 CD22P20273 847 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 AK4P27144 223 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 HNF4AP41235 474 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 ACADVLP49748 655 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SRP54P61011 504 aaKnown RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 UFM1P61960 85 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 YPEL5P62699 121 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 IRX1P78414 480 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 CTBSQ01459 385 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 TBL3Q12788 808 aaKnown RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 MAD2L1Q13257 205 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 CLCA4Q14CN2 919 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 UAP1L1Q3KQV9 507 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 RFTN2Q52LD8 501 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 PDCD4Q53EL6 469 aaKnown RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 PRAMEF14Q5SWL7 426 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 CATSPEREQ5SY80 951 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 PRAMEF13Q5VWM6 474 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 REP15Q6BDI9 236 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 GRHL2Q6ISB3 625 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 LAYNQ6UX15 382 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 FUNDC1Q8IVP5 155 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 PARP9Q8IXQ6 854 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 LRRC56Q8IYG6 542 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 ULK2Q8IYT8 1036 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 RNF175Q8N4F7 328 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 DEFB119Q8N690 84 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 EFCAB3Q8N7B9 438 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SLC5A11Q8WWX8 675 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 NRTNQ99748 197 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 ACAT2Q9BWD1 397 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SGPP1Q9BX95 441 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 ACPTQ9BZG2 426 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 RASSF4Q9H2L5 321 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SDR39U1Q9NRG7 319 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 C1orf109Q9NX04 203 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 NDE1Q9NXR1 346 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 CCL27Q9Y4X3 112 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 PCM1Q15154 2024 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 MRASO14807 208 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 MGRN1O60291 552 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 NRP2O60462 931 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 G6PDP11413 515 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 CCND1P24385 295 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 HSD17B2P37059 387 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 ACTR1BP42025 376 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 RABIFP47224 123 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 KCNK10P57789 538 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 ACTR1AP61163 376 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 RPE65Q16518 533 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 HIST2H2ACQ16777 129 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 VPS26BQ4G0F5 336 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 C6orf163Q5TEZ5 329 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 CACHD1Q5VU97 1274 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 HIST2H2AA3Q6FI13 130 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SLC30A9Q6PML9 568 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 CYP20A1Q6UW02 462 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SLCO4C1Q6ZQN7 724 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 RNF165Q6ZSG1 346 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 TMEM145Q8NBT3 493 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SETD7Q8WTS6 366 aaKnown RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 CAMK1GQ96NX5 476 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 MTERF1Q99551 399 aaKnown RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 BRINP2Q9C0B6 783 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 TMEM168Q9H0V1 697 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 DENND2DQ9H6A0 471 aaPredicted RBP8.36□□□□□ -1.07
TDP1-203ENST00000393454 WDR41Q9HAD4 459 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms