RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZNF749O43361 778 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 CTSVO60911 334 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR2B3O76000 313 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 C1QAP02745 245 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 STATHP02808 62 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 FURINP09958 794 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 CCNYL3P0C7X3 344 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ERGP11308 486 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ENO3P13929 434 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 TCN2P20062 427 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 IMPA1P29218 277 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 OAS2P29728 719 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 RPA3P35244 121 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ITGA1P56199 1179 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 TAS2R39P59534 338 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ABHD18Q0P651 414 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 DNASE1L3Q13609 305 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 LY6DQ14210 128 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 MAP7Q14244 749 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 FRG1Q14331 258 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 FRMPD2BQ6IN97 320 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM45BPQ6NSW5 357 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 CYB5D1Q6P9G0 228 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 FIGLAQ6QHK4 219 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 C3orf62Q6ZUJ4 267 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 NEK10Q6ZWH5 1172 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 GALNT7Q86SF2 657 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZC3HC1Q86WB0 502 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 CEP97Q8IW35 865 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 TMEM151BQ8IW70 566 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 CTAGE3PQ8IX95 158 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 SYTL1Q8IYJ3 562 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 MYO1HQ8N1T3 1032 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 SPATA6LQ8N4H0 392 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 MMGT1Q8N4V1 131 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 DNAJC22Q8N4W6 341 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 RAB42Q8N4Z0 105 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 METTL27Q8N6F8 245 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZNF655Q8N720 491 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR2L3Q8NG85 312 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 GABPB2Q8TAK5 448 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 HMGCLL1Q8TB92 370 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM45AQ8TCE6 357 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 MAGEC3Q8TD91 643 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 IFT81Q8WYA0 676 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 TTC9Q92623 222 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 KIAA1143Q96AT1 154 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ALKBH8Q96BT7 664 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 MRRFQ96E11 262 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 TCTN2Q96GX1 697 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 VPS39Q96JC1 886 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 RAB11FIP5Q9BXF6 653 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC12A9Q9BXP2 914 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 SEMA4CQ9C0C4 833 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC7A5P2Q9GIP4 190 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 CHST8Q9H2A9 424 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ACTR5Q9H9F9 607 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 LRRC4CQ9HCJ2 640 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM114A2Q9NRY5 505 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZDHHC18Q9NUE0 388 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 PCMTD2Q9NV79 361 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 CUEDC1Q9NWM3 386 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 STOX2Q9P2F5 926 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 KLHL42Q9P2K6 505 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 DHCR7Q9UBM7 475 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 SH2B3Q9UQQ2 575 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 PDE10AQ9Y233 779 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 MTO1Q9Y2Z2 717 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 VWA7Q9Y334 891 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 PIKFYVEQ9Y2I7 2098 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 LOC105369274A0A096LPK9 316 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 IGKV1-8A0A0C4DH67 115 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 LOC102723532A0A0G2JNH3 316 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 A0A0J9YVX5 310 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CTAGE15A4D2H0 777 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM159BA6NKW6 160 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 E7ENX8 843 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 MEN1O00255 615 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CDC7O00311 574 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZSCAN9O15535 394 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 PHGDHO43175 533 aaKnown RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZBTB14O43829 449 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 MED26O95402 600 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 GUCA1CO95843 209 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM87AP0C7U9 286 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CTAGE8P0CG41 777 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CBSLP0DN79 551 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ECHS1P30084 290 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 RORAP35398 523 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CBSP35520 551 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SKIV2L2P42285 1042 aaKnown RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 RGS4P49798 205 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 IL2P60568 153 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 TBPL1P62380 186 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CAV1Q03135 178 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 TAP2Q03519 686 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CDC20Q12834 499 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CBLBQ13191 982 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ERV3-1Q14264 604 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 TBR1Q16650 682 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms