RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ZNF382Q96SR6 550 aa13.17□□□□□ -0.3
PTN-202ENST00000393083 DUSP23Q9BVJ7 150 aa13.17□□□□□ -0.3
PTN-202ENST00000393083 WDR55Q9H6Y2 383 aaPredicted RBP13.17□□□□□ -0.3
PTN-202ENST00000393083 NOL11Q9H8H0 719 aaKnown RBP13.17□□□□□ -0.3
PTN-202ENST00000393083 ZNHIT2Q9UHR6 403 aa13.17□□□□□ -0.3
PTN-202ENST00000393083 STK38LQ9Y2H1 464 aa13.17□□□□□ -0.3
PTN-202ENST00000393083 GPSM3Q9Y4H4 160 aa13.17□□□□□ -0.3
PTN-202ENST00000393083 DNMT3AQ9Y6K1 912 aaPredicted RBP13.17□□□□□ -0.3
PTN-202ENST00000393083 CNOT1A5YKK6 2376 aaKnown RBP13.16□□□□□ -0.3
PTN-202ENST00000393083 LY6G6EA0A0G2JKS1 128 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 A0A1B0GTL3 188 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 KRT87PA6NCN2 255 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 K7EPI3 171 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 SDHDO14521 159 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 ESRRBO95718 433 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 LDOC1O95751 146 aaPredicted RBP13.16□□□□□ -0.3
PTN-202ENST00000393083 ANXA6P08133 673 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 SERPINA6P08185 405 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 FGF4P08620 206 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 ALPPL2P10696 532 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 AK4P27144 223 aaPredicted RBP13.16□□□□□ -0.3
PTN-202ENST00000393083 EPHA3P29320 983 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 HNMTP50135 292 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 INHBCP55103 352 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 FOXA1P55317 472 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 PKNOX1P55347 436 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 METTL2BQ6P1Q9 378 aaKnown RBP13.16□□□□□ -0.3
PTN-202ENST00000393083 LRRC70Q7Z2Q7 622 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 GKN2Q86XP6 184 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 FBXL8Q96CD0 374 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 CNDP2Q96KP4 475 aaKnown RBP13.16□□□□□ -0.3
PTN-202ENST00000393083 CCDC28BQ9BUN5 200 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 DPEP2Q9H4A9 486 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 ARMCX1Q9P291 453 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 FTSJ1Q9UET6 329 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 SLC23A2Q9UGH3 650 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 U3KQA8 63 aa13.16□□□□□ -0.3
PTN-202ENST00000393083 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 ANKRD65E5RJM6 399 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 E9PBE3 544 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 OR7A17O14581 309 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 TNFSF14O43557 240 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 KLHL41O60662 606 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 STK16O75716 305 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 OR4F21O95013 312 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 ACP5P13686 325 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 PRDX3P30048 256 aaKnown RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 GDF5P43026 501 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 CCNG1P51959 295 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 ILF3Q12906 894 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTN-202ENST00000393083 BNIP1Q12981 228 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 RPA4Q13156 261 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 LRP8Q14114 963 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 LSM12Q3MHD2 195 aaKnown RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 C6orf132Q5T0Z8 1188 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 FAM91A1Q658Y4 838 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 NXNQ6DKJ4 435 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 ZCCHC8Q6NZY4 707 aaKnown RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 OGFOD3Q6PK18 319 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 PDZD3Q86UT5 571 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 OR52B6Q8NGF0 335 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 TWIST2Q8WVJ9 160 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 ATP6V1E2Q96A05 226 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 APOLD1Q96LR9 279 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 TIMM29Q9BSF4 260 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 GSDMCQ9BYG8 508 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 MEAF6Q9HAF1 191 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 TOR4AQ9NXH8 423 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 SLC12A4Q9UP95 1085 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 SPEGQ15772 3267 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 KLHL33A6NCF5 533 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 PRR19A6NJB7 356 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 WDR47O94967 919 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 C1orf105O95561 183 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 OTCP00480 354 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 MYF5P13349 255 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 NCF2P19878 526 aaPredicted RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 GGT5P36269 586 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 SLC6A12P48065 614 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 TRAF3Q13114 568 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 UBAP2LQ14157 1087 aaKnown RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 CCSMST1Q4G0I0 132 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 LETMD1Q6P1Q0 360 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 SLC30A9Q6PML9 568 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 UNC5DQ6UXZ4 953 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 CHST15Q7LFX5 561 aaPredicted RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 EFL1Q7Z2Z2 1120 aaKnown RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 SFTPA2Q8IWL1 248 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 SLC35F3Q8IY50 421 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 DCBLD1Q8N8Z6 715 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 SNX31Q8N9S9 440 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 FAM46DQ8NEK8 389 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 C19orf60Q96EN9 201 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 MAELQ96JY0 434 aaKnown RBP13.15□□□□□ -0.3
PTN-202ENST00000393083 CCDC138Q96M89 665 aa13.15□□□□□ -0.3
PTN-202ENST00000393083 CDK15Q96Q40 435 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms