RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TRIB2Q92519 343 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 MYOCQ99972 504 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 PPP1R14DQ9NXH3 145 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 ZBTB11O95625 1053 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 UGT2B4P06133 528 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 MAXP61244 160 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 ENPP2Q13822 863 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 MELKQ14680 651 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 UBAP2Q5T6F2 1119 aaKnown RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SLC15A3Q8IY34 581 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 DUSP9Q99956 384 aaKnown RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SEMA3CQ99985 751 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 NUSAP1Q9BXS6 441 aaKnown RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 C19orf25Q9UFG5 118 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 HCKP08631 526 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 RAP2AP10114 183 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 CSTF2P33240 577 aaKnown RBP eCLIP14.43□□□□□ -0.12e-10■■■■■ 28.8
CCDC50-201ENST00000392455 RYKP34925 604 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 ART1P52961 327 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SLC25A3Q00325 362 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SDHAF4Q5VUM1 108 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 FIBCD1Q8N539 461 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 CPT1CQ8TCG5 803 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 EIF5A2Q9GZV4 153 aaKnown RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 AGO1Q9UL18 857 aaKnown RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 CEP295NLQ96MC4 621 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 ASPNQ9BXN1 380 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 PAK1IP1Q9NWT1 392 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SLC7A11Q9UPY5 501 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 DNAJB5O75953 348 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 NKX6-1P78426 367 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 MLIPQ5VWP3 458 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 CDT1Q9H211 546 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SNX10Q9Y5X0 201 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 NPIPA5E9PKD4 350 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 TGM6O95932 706 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 ATAT1Q5SQI0 421 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 C10orf62Q5T681 223 aaPredicted RBP14.42□□□□□ -0.1
CCDC50-201ENST00000392455 TMCO2Q7Z6W1 182 aaPredicted RBP14.42□□□□□ -0.1
CCDC50-201ENST00000392455 OR7G2Q8NG99 324 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 DQX1Q8TE96 717 aaKnown RBP14.42□□□□□ -0.1
CCDC50-201ENST00000392455 SNRNP25Q9BV90 132 aaKnown RBP14.42□□□□□ -0.1
CCDC50-201ENST00000392455 CCDC106Q9BWC9 280 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 LRRC19Q9H756 370 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 POLE4Q9NR33 117 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 NPIPA1Q9UND3 350 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 CAPN15O75808 1086 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 SHBGP04278 402 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 AGXTP21549 392 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 XKP51811 444 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 ARL6IP1Q15041 203 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 BEND4Q6ZU67 534 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 USP29Q9HBJ7 922 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 PIP5K1BO14986 540 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 LIASO43766 372 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 CXCR1P25024 350 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF45Q02386 682 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 PLP2Q04941 152 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 RNASE12Q5GAN4 147 aaKnown RBP14.42□□□□□ -0.1
CCDC50-201ENST00000392455 GSTCDQ8NEC7 633 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 SLC35C1Q96A29 364 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 ACO2Q99798 780 aaKnown RBP14.42□□□□□ -0.1
CCDC50-201ENST00000392455 TP73O15350 636 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 HLA-DPB1P04440 258 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 IRF2P14316 349 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 DPP6P42658 865 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF767PQ75MW2 155 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 ZSCAN1Q8NBB4 408 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 SLC30A2Q9BRI3 323 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 TLR10Q9BXR5 811 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 OR2B2Q9GZK3 357 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 UNC93B1Q9H1C4 597 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 GADD45GO95257 159 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 DIRAS3O95661 229 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 CUZD1Q86UP6 607 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 ATP6V1C2Q8NEY4 427 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 FUZQ9BT04 418 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 SNX15Q9NRS6 342 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 KLHL13Q9P2N7 655 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 TNFRSF10DQ9UBN6 386 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 CPSF4LA6NMK7 179 aaKnown RBP14.42□□□□□ -0.1
CCDC50-201ENST00000392455 CLDN11O75508 207 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 GLRA2P23416 452 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 MAGEA8P43361 318 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 MZT1Q08AG7 82 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 SPIN4Q56A73 249 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 AKR1C8PQ5T2L2 129 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 NT5DC1Q5TFE4 455 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 TMEM125Q96AQ2 219 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 IRF2BPLQ9H1B7 796 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 SNTG1Q9NSN8 517 aa14.42□□□□□ -0.1
CCDC50-201ENST00000392455 NEDD8-MDP1E9PL57 170 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 TLL1O43897 1013 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 CREBL2O60519 120 aaPredicted RBP14.41□□□□□ -0.1
CCDC50-201ENST00000392455 FARS2O95363 451 aaKnown RBP14.41□□□□□ -0.1
CCDC50-201ENST00000392455 TNFSF9P41273 254 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 NDUFV1P49821 464 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 GALNT5Q7Z7M9 940 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 UBQLNLQ8IYU4 475 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 P2RX2Q9UBL9 471 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms