RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IL12AP29459 219 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACSL1P33121 698 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 NEK2P51955 445 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 KIAA1024LP59773 190 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 FOXM1Q08050 763 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CSTF3Q12996 717 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 PYCR3Q53H96 274 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CACHD1Q5VU97 1274 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CAPRIN2Q6IMN6 1127 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRMT9Q6P2P2 845 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CHST15Q7LFX5 561 aaPredicted RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR5AR1Q8NGP9 310 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 HLA-CQ95604 372 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 WDR34Q96EX3 536 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CMTM7Q96FZ5 175 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 HOPXQ9BPY8 73 aaPredicted RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 GPATCH1Q9BRR8 931 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 BTBD1Q9H0C5 482 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 TMED5Q9Y3A6 229 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 KANSL1LA0AUZ9 987 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 ASPDHA6ND91 283 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 CCDC154A6NI56 674 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 LRRC72A6NJI9 287 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 C10orf142B7Z368 130 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 H0Y3Z8 333 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 FKBP6O75344 327 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 ACP5P13686 325 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 HSD3B1P14060 373 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 NPPBP16860 134 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 HSD3B2P26439 372 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 CCNIQ14094 377 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 ARHGAP19Q14CB8 494 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 RCN1Q15293 331 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 TLR1Q15399 786 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 MLF2Q15773 248 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 AAGABQ6PD74 315 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 SLCO4C1Q6ZQN7 724 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 MINDY1Q8N5J2 469 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 SETD7Q8WTS6 366 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 NEIL2Q969S2 332 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 SLC45A3Q96JT2 553 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 EHD1Q9H4M9 534 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 SGK2Q9HBY8 427 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 CCDC177Q9NQR7 707 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 GID8Q9NWU2 228 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 USP36Q9P275 1121 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 TMEM181Q9P2C4 612 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 LEF1Q9UJU2 399 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 NDRG2Q9UN36 371 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 PSMD13Q9UNM6 376 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 DYRK1BQ9Y463 629 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 PCDHGA11Q9Y5H2 935 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 TRIM38O00635 465 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 PI15O43692 258 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 HSD17B2P37059 387 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 CLCNKAP51800 687 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 CCDC6Q16204 474 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 LEXMQ3ZCV2 418 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 USP39Q53GS9 565 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 LAYNQ6UX15 382 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 TBC1D21Q8IYX1 336 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 GLB1L3Q8NCI6 653 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 PHC3Q8NDX5 983 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 VPS33AQ96AX1 596 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 LRCH3Q96II8 777 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 TRIT1Q9H3H1 467 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 BRF2Q9HAW0 419 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 POLMQ9NP87 494 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 ADA2Q9NZK5 511 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 SUCOQ9UBS9 1254 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 SUFUQ9UMX1 484 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 PCM1Q15154 2024 aa11.08□□□□□ -0.64
SMARCAL1-203ENST00000392128 FXYD1O00168 92 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 FPGTO14772 594 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 NPPAP01160 153 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 IGLV3-19P01714 112 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 CHRNB1P11230 501 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 PRPS2P11908 318 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 HNRNPA2B1P22626 353 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 VARSP26640 1264 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 MAPK1P28482 360 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 PTGR1Q14914 329 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 SAMD4BQ5PRF9 694 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 C10orf62Q5T681 223 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 ATG9BQ674R7 924 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 SUSD1Q6UWL2 747 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 ZNF852Q6ZMS4 543 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 FAM9CQ8IZT9 166 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 LIX1Q8N485 282 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 HMGB4Q8WW32 186 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 LRRC58Q96CX6 371 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 METTL2AQ96IZ6 378 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 FCRL1Q96LA6 429 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 MYOCQ99972 504 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 SPATA6Q9NWH7 488 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 SPATA7Q9P0W8 599 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 ABCD2Q9UBJ2 740 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 BCAP29Q9UHQ4 241 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 PACSIN3Q9UKS6 424 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms