RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 C19orf18Q8NEA5 215 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 CSNK2A3Q8NEV1 391 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 ABHD11Q8NFV4 315 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 OR4C15Q8NGM1 316 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 OR6Q1Q8NGQ2 317 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 OR13C9Q8NGT0 318 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 TBC1D15Q8TC07 691 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 DTD1Q8TEA8 209 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SETD7Q8WTS6 366 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 NSMCE1Q8WV22 266 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 LINC01599Q8WXQ3 324 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 ARNTL2Q8WYA1 636 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 LPGAT1Q92604 370 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 PROX1Q92786 737 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SLCO2A1Q92959 643 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 EMG1Q92979 244 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SLCO4A1Q96BD0 722 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 ARHGEF26Q96DR7 871 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 MMABQ96EY8 250 aaPredicted RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 TOE1Q96GM8 510 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 TMX3Q96JJ7 454 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 C4orf36Q96KX1 117 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SLITRK1Q96PX8 696 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 NUDT22Q9BRQ3 303 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 TUBGCP2Q9BSJ2 902 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 TMEM43Q9BTV4 400 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 CCDC28BQ9BUN5 200 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 KATNB1Q9BVA0 655 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 PAPOLGQ9BWT3 736 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 CDADC1Q9BWV3 514 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 NMNAT2Q9BZQ4 307 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SLC22A4Q9H015 551 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 RACGAP1Q9H0H5 632 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 NAPBQ9H115 298 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SNX25Q9H3E2 840 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 LRRN3Q9H3W5 708 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 GOLPH3Q9H4A6 298 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 PDZD7Q9H5P4 517 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 NOL11Q9H8H0 719 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 MANSC1Q9H8J5 431 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 CNOT10Q9H9A5 744 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 COG4Q9H9E3 785 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 MEAF6Q9HAF1 191 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 ROPN1Q9HAT0 212 aaPredicted RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 VAT1LQ9HCJ6 419 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 HHATLQ9HCP6 504 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 PDGFCQ9NRA1 345 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SAMSN1Q9NSI8 373 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 ZNF701Q9NV72 531 aaPredicted RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 MRPL22Q9NWU5 206 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 RHBDL2Q9NX52 303 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SIDT1Q9NXL6 827 aaKnown RBP3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 GTSE1Q9NYZ3 720 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 GRHL1Q9NZI5 618 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 NCKIPSDQ9NZQ3 722 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 HSPB7Q9UBY9 170 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 CYB5R1Q9UHQ9 305 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 ENOPH1Q9UHY7 261 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 UTS2RQ9UKP6 389 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SCML1Q9UN30 329 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 SLC12A4Q9UP95 1085 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 PKP3Q9Y446 797 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 PCDHGB1Q9Y5G3 927 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 FADS3Q9Y5Q0 445 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 WASF2Q9Y6W5 498 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 NEURL4Q96JN8 1562 aa3.29□□□□□ -1.88
TRAJ17-201ENST00000390520 ABCC11Q96J66 1382 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 WDR33Q9C0J8 1336 aaKnown RBP3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 A0A087WUV0 522 aaPredicted RBP3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 A0A0A6YYK5 440 aaPredicted RBP3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 A0A1W2PPM1 405 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 LNP1A1A4G5 178 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 MTMR11A4FU01 709 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 MGAT4DA6NG13 374 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 PRSS29PA6NIE9 313 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 NOTOA8MTQ0 251 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 A8MXQ7 604 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 PRSS44E7EML9 344 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 H3BMM5 538 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 TRIM77I1YAP6 450 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 LAD1O00515 517 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 PPP6CO00743 305 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 SLC9A3R1O14745 358 aaPredicted RBP3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 NDUFS4O43181 175 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 PSMD3O43242 534 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 PI15O43692 258 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 TSPAN2O60636 221 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 UGDHO60701 494 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 LRCH4O75427 683 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 NDUFS3O75489 264 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 UPK3AO75631 287 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 SMNDC1O75940 238 aaKnown RBP eCLIP3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 GLCEO94923 617 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 UNC5CO95185 931 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 APOL3O95236 402 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 ZBTB11O95625 1053 aaPredicted RBP3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 CER1O95813 267 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 MT-ND1P03886 318 aa3.28□□□□□ -1.88
TRAJ17-201ENST00000390520 C4BPAP04003 597 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms