RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 EIF5P55010 431 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DIO3P55073 304 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CDH11P55287 796 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CLDN2P57739 230 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SPINK7P58062 85 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ST8SIA6P61647 398 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RPS18P62269 152 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CSNK2A1P68400 391 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 KRT83P78385 493 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF85Q03923 595 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PRKCDQ05655 676 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC18A2Q05940 514 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 FOXM1Q08050 763 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TGM3Q08188 693 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PLCXD2Q0VAA5 305 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RASGEF1BQ0VAM2 473 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DAZ2Q13117 558 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PRKAA1Q13131 559 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC13A2Q13183 592 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CTBP1Q13363 440 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 MSLNQ13421 630 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 MADCAM1Q13477 382 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 BIRC3Q13489 604 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ITGA7Q13683 1181 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF235Q14590 738 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PLS1Q14651 629 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 KCNAB1Q14722 419 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DRAP1Q14919 205 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ATXN7L3Q14CW9 347 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TNIP1Q15025 636 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NONOQ15233 471 aaKnown RBP eCLIP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PCBP2Q15366 365 aaKnown RBP eCLIP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TGIF1Q15583 401 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TAB1Q15750 504 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 UPP1Q16831 310 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF181Q2M3W8 571 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 EIF2S3LQ2VIR3 472 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DEFB116Q30KQ4 102 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 P3H1Q32P28 736 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXO43Q4G163 708 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PDLIM3Q53GG5 364 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ESCO2Q56NI9 601 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 BRDTQ58F21 947 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF766Q5HY98 468 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NHSL2Q5HYW2 709 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PAGE2BQ5JRK9 111 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 C6orf136Q5SQH8 315 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM83BQ5T0W9 1011 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NDUFAF5Q5TEU4 345 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 GGNBP1Q5YKI7 109 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM225Q6GV28 225 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RAET1GQ6H3X3 334 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 C22orf42Q6IC83 251 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NANOGP8Q6NSW7 305 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CES5AQ6NT32 575 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 AADACL2Q6P093 401 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DENND1BQ6P3S1 775 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC25A47Q6Q0C1 308 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 IL34Q6ZMJ4 242 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PIK3AP1Q6ZUJ8 805 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DENND5BQ6ZUT9 1274 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 USP50Q70EL3 339 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 MTSS1LQ765P7 747 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NOL8Q76FK4 1167 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TCF24Q7RTU0 167 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM179BQ7Z7N9 219 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 GALNT7Q86SF2 657 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF429Q86V71 674 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 LRRTM3Q86VH5 581 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PARGQ86W56 976 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D10CQ8IV04 446 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SBSPONQ8IVN8 264 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 AMOTL1Q8IY63 956 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 KIAA0319LQ8IZA0 1049 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RDH10Q8IZV5 341 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 GPR137CQ8N3F9 429 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PPM1KQ8N3J5 372 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PARP16Q8N5Y8 322 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CELF5Q8N6W0 485 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PCDH20Q8N6Y1 951 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CYB561D1Q8N8Q1 229 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SCAIQ8N9R8 606 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 Q8N9W7 124 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 THAP8Q8NA92 274 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TDRD5Q8NAT2 981 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CLRN3Q8NCR9 226 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NPEPL1Q8NDH3 523 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 C1orf64Q8NEQ6 169 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ACVR1CQ8NER5 493 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TRPV3Q8NET8 790 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CSNK2A3Q8NEV1 391 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 BEST4Q8NFU0 473 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OR5M8Q8NGP6 311 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OR1B1Q8NGR6 318 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OR1J1Q8NGS3 322 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OR1P1Q8NH06 330 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OR56A3Q8NH54 315 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OR5R1Q8NH85 324 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RASSF8Q8NHQ8 419 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF563Q8TA94 476 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms