RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SV2CQ496J9 727 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 GPAT3Q53EU6 434 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 RUNDC3AQ59EK9 446 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 LBX2Q6XYB7 198 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.12□□□□□ -0.317e-10■■■■■ 66.3
CCDC57-202ENST00000389641 FAM109AQ8N4B1 249 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 STX19Q8N4C7 294 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 RASSF5Q8WWW0 418 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 NXF2Q9GZY0 626 aaKnown RBP13.12□□□□□ -0.31
CCDC57-202ENST00000389641 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SYTL2Q9HCH5 934 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 NPAP1Q9NZP6 1156 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 MCM3APO60318 1980 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
CCDC57-202ENST00000389641 A0A1W2PQ09 198 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 IL7P13232 177 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 GDF5P43026 501 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 DUSP7Q16829 419 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 SLC7A6Q92536 515 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 PGAP3Q96FM1 320 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-202ENST00000389641 TPD52L3Q96J77 140 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 B3GALT6Q96L58 329 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 OR5M11Q96RB7 305 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 CNPPD1Q9BV87 410 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 UCK2Q9BZX2 261 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 DERL2Q9GZP9 239 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 CATSPERBQ9H7T0 1116 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 ACOXLQ9NUZ1 547 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 PCDHGA6Q9Y5G7 932 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 HMX3A6NHT5 357 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 GFRA2O00451 464 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 GABRDO14764 452 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 GPR39O43194 453 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 NDUFS3O75489 264 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 LRATO95237 230 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 ADORA3P0DMS8 318 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 CDKN2CP42773 168 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 DGKEP52429 567 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 POU6F2P78424 691 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-202ENST00000389641 HOXC5Q00444 222 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 ELP6Q0PNE2 266 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 CAMK2GQ13555 558 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-202ENST00000389641 ALKAL1Q6UXT8 129 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 AGMOQ6ZNB7 445 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 ZNF551Q7Z340 670 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-202ENST00000389641 IPCEF1Q8WWN9 437 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-202ENST00000389641 GDF15Q99988 308 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 ABCB8Q9NUT2 735 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 DERAQ9Y315 318 aa13.11□□□□□ -0.31
CCDC57-202ENST00000389641 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 LCHNA4D1U4 455 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 E5RI56 91 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 SLITRK5O94991 958 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 RETP07949 1114 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 CCNYL3P0C7X3 344 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 STC1P52823 247 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 MXD1Q05195 221 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 GNASQ5JWF2 1037 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 TIGD7Q6NT04 549 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 GLRX5Q86SX6 157 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 GLCCI1Q86VQ1 547 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 LAX1Q8IWV1 398 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 LINC01465Q8N7H1 131 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 UTP15Q8TED0 518 aaKnown RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 COQ8BQ96D53 544 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 SIGLEC11Q96RL6 698 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 AASDHPPTQ9NRN7 309 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 E9PAM4 449 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 KRT6AP02538 564 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 KRT6BP04259 564 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 ATXN1LP0C7T5 689 aaKnown RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 COL6A1P12109 1028 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 SSTR4P31391 388 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 DOC2BQ14184 412 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 DMC1Q14565 340 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 PTPRRQ15256 657 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 DOK6Q6PKX4 331 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 VN1R5Q7Z5H4 357 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 MCCC1Q96RQ3 725 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 SEMA3CQ99985 751 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 DPH2Q9BQC3 489 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 THUMPD1Q9NXG2 353 aaKnown RBP13.1□□□□□ -0.31
CCDC57-202ENST00000389641 PCDHB5Q9Y5E4 795 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 ACTL7AQ9Y615 435 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 UPK3BL1B0FP48 263 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 UPK3BL2E5RIL1 263 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 PEX11BO96011 259 aa13.1□□□□□ -0.31
CCDC57-202ENST00000389641 WARSP23381 471 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms