RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 AGR2O95994 175 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LAMP2P13473 410 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 RPL35AP18077 110 aaKnown RBP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CSTF2P33240 577 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LYZP61626 148 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SIRPAP78324 504 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 EIF4EBP2Q13542 120 aaPredicted RBP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 RFTN1Q14699 578 aaPredicted RBP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TAB1Q15750 504 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 FAM189A2Q15884 450 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 EXT1Q16394 746 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CA9Q16790 459 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 MS4A18Q3C1V0 323 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PRR30Q53SZ7 412 aaPredicted RBP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LCLAT1Q6UWP7 414 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 BAIAP2L2Q6UXY1 529 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CHMP1BQ7LBR1 199 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZER1Q7Z7L7 766 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 NUDT13Q86X67 352 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PHC2Q8IXK0 858 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SMAP1Q8IYB5 467 aaPredicted RBP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 FBXO39Q8N4B4 442 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CD177Q8N6Q3 437 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SLC37A3Q8NCC5 494 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 RHOXF1Q8NHV9 184 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 C9orf43Q8TAL5 461 aaPredicted RBP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LRRC59Q96AG4 307 aaKnown RBP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 DHX58Q96C10 678 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 C4orf45Q96LM5 186 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 C7orf26Q96N11 449 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 NEK1Q96PY6 1258 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PSMB7Q99436 277 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LPAR4Q99677 370 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ATF6BQ99941 703 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ITPAQ9BY32 194 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 NYXQ9GZU5 481 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SPATC1LQ9H0A9 340 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 WNT5BQ9H1J7 359 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ADNPQ9H2P0 1102 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMEM98Q9Y2Y6 226 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 UMODL1Q5DID0 1318 aa1.88□□□□□ -2.11
RNU6-1040P-201ENST00000383974 IGLV4-3A0A075B6K6 122 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 FEZF1A0PJY2 475 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LRRC72A6NJI9 287 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SRRM4A7MD48 611 aaKnown RBP1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 K7EQD1 137 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TEX28O15482 410 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PRAMEF11O60813 436 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SLCO2B1O94956 709 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 OR2T7P0C7T2 308 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TNFAIP3P21580 790 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ACSL1P33121 698 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SOX3P41225 446 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LMAN1P49257 510 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CRYMQ14894 314 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 GARNL3Q5VVW2 1013 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SNX30Q5VWJ9 437 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMEM64Q6YI46 380 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 AACSQ86V21 672 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PARP8Q8N3A8 854 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 C11orf42Q8N5U0 333 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 RTL3Q8N8U3 475 aaKnown RBP1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SCFD2Q8WU76 684 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SSMEM1Q8WWF3 244 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 C2orf48Q96LS8 159 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TBATAQ96M53 351 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 FAM20AQ96MK3 541 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 Q9N2K0 584 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 WSB2Q9NYS7 404 aaPredicted RBP1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PLAGL1Q9UM63 463 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZNF148Q9UQR1 794 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 NME7Q9Y5B8 376 aa1.87□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TSPAN1O60635 241 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TBX18O95935 607 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SMIM18P0DKX4 95 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PRKAR1AP10644 381 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ARL3P36405 182 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SLC9A3P48764 834 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ARSEP51690 589 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 MFAP4P55083 255 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 MAT1AQ00266 395 aaKnown RBP1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZNF177Q13360 481 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMEM132DQ14C87 1099 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMEM95Q3KNT9 176 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SYT14P1Q58G82 188 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SPECC1Q5M775 1068 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 RNLSQ5VYX0 342 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TEX38Q6PEX7 206 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 REG3GQ6UW15 175 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CEP57Q86XR8 500 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 MMD2Q8IY49 270 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 IL17REQ8NFR9 667 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 OR5T2Q8NGG2 359 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CALML4Q96GE6 196 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 OLFM1Q99784 485 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 MTHFD2LQ9H903 347 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TRPV4Q9HBA0 871 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms