RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CEP104O60308 925 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 VAPBO95292 243 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 MMP11P24347 488 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 NMBRP28336 390 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 MAGEA6P43360 314 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
RPAIN-202ENST00000381208 AIMP2Q13155 320 aaKnown RBP12.45□□□□□ -0.42
RPAIN-202ENST00000381208 ARHGAP19Q14CB8 494 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 FAM69BQ5VUD6 431 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 IRAK1BP1Q5VVH5 260 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 TTLL10Q6ZVT0 673 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 IQCKQ8N0W5 287 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 RBMXL3Q8N7X1 1067 aaKnown RBP12.45□□□□□ -0.42
RPAIN-202ENST00000381208 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 IL17FQ96PD4 163 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 LZTFL1Q9NQ48 299 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 FAM114A2Q9NRY5 505 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 CUEDC1Q9NWM3 386 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-202ENST00000381208 KLHL42Q9P2K6 505 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 B3GNT3Q9Y2A9 372 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 ANKRD12Q6UB98 2062 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 AGFG2O95081 481 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 MLNP12872 115 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 MGAT1P26572 445 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 GRIA3P42263 894 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 CRADDP78560 199 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 LAPTM4AQ15012 233 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 TTLL9Q3SXZ7 439 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 ANKRD20A4Q4UJ75 823 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 FCRL6Q6DN72 434 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 PRMT9Q6P2P2 845 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 PPP1R32Q7Z5V6 425 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 TAX1BP1Q86VP1 789 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 ZADH2Q8N4Q0 377 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 LPGAT1Q92604 370 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 MFSD3Q96ES6 412 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 BIRC8Q96P09 236 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 PSMG3-AS1Q96PY0 264 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 NAP1L3Q99457 506 aaPredicted RBP12.44□□□□□ -0.42
RPAIN-202ENST00000381208 LRRC4CQ9HCJ2 640 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 SEMA3GQ9NS98 782 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 INTS10Q9NVR2 710 aaKnown RBP12.44□□□□□ -0.42
RPAIN-202ENST00000381208 SAMD15Q9P1V8 674 aa12.44□□□□□ -0.42
RPAIN-202ENST00000381208 E5RI56 91 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 VPS26AO75436 327 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CCNDBP1O95273 360 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 MATN4O95460 622 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CATP04040 527 aaKnown RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 UMODP07911 640 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CHRM3P20309 590 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 GNLYP22749 145 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 ARNTP27540 789 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CMPK1P30085 196 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 FMO4P31512 558 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 KCNJ1P48048 391 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CARSP49589 748 aaKnown RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 GBX1Q14549 363 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 SLC9A5Q14940 896 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 MUM1Q2TAK8 710 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 NEK10Q6ZWH5 1172 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 LMNTD2Q8IXW0 634 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 C2orf73Q8N5S3 287 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 Q8NA96 180 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 OR2L3Q8NG85 312 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 OR9A1PQ8NGU1 263 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 SMPDL3AQ92484 453 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 ZNF552Q9H707 407 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 XAB2Q9HCS7 855 aaKnown RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 SLC22A11Q9NSA0 550 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 SYBUQ9NX95 663 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CDC23Q9UJX2 597 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CDC14AQ9UNH5 594 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 KLHL20Q9Y2M5 609 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CNTRLQ7Z7A1 2325 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 FER1L5A0AVI2 2057 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 FAM237BA0A1B0GVD1 139 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 PCDH17O14917 1159 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 PRPF4O43172 522 aaKnown RBP eCLIP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CNOT3O75175 753 aaKnown RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 DDAH2O95865 285 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CTSBP07858 339 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 ERVK-10P10266 1014 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 ERGP11308 486 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 PKMP14618 531 aaKnown RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 BDKRB1P46663 353 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 RELAQ04206 551 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 OCA2Q04671 838 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 GPS1Q13098 491 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 KCNJ11Q14654 390 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 NKG7Q16617 165 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CTSL3PQ5NE16 218 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 WASHC2DQ5SRD0 308 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 NEPROQ6NW34 567 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CASC4Q6P4E1 433 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CNSTQ6PJW8 725 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 RNF44Q7L0R7 432 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CILP2Q8IUL8 1156 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 LRRC8AQ8IWT6 810 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 FAM20CQ8IXL6 584 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms