RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TSSK3Q96PN8 268 aa15.85■□□□□ 0.13
NKX3-1-201ENST00000380871 LRTM1Q9HBL6 345 aa15.85■□□□□ 0.13
NKX3-1-201ENST00000380871 HCFC1R1Q9NWW0 138 aa15.85■□□□□ 0.13
NKX3-1-201ENST00000380871 LSM7Q9UK45 103 aaKnown RBP15.85■□□□□ 0.13
NKX3-1-201ENST00000380871 PCDHGA4Q9Y5G9 962 aa15.85■□□□□ 0.13
NKX3-1-201ENST00000380871 TNPO3Q9Y5L0 923 aaKnown RBP15.85■□□□□ 0.13
NKX3-1-201ENST00000380871 PIKFYVEQ9Y2I7 2098 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 RGS14O43566 566 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 ULK1O75385 1050 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 JRKO75564 520 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 MASP1P48740 699 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 EIF2B2P49770 351 aaKnown RBP15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 LMAN2Q12907 356 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 OXA1LQ15070 435 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 ADHFE1Q8IWW8 467 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 SLC39A11Q8N1S5 342 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 ZCCHC7Q8N3Z6 543 aaKnown RBP15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 OR7A2PQ8NGA2 310 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 OR5K1Q8NHB7 308 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 OPTCQ9UBM4 332 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 INTS6Q9UL03 887 aaKnown RBP15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 VPS4AQ9UN37 437 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 hCG_2039718K7EN88 272 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 MTX2O75431 263 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 FADS2O95864 444 aaKnown RBP15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 MSH3P20585 1137 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 IGFBP5P24593 272 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 HNF1BP35680 557 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 GNPDA1P46926 289 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 PGS1Q32NB8 556 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 PAGE2BQ5JRK9 111 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 RETSATQ6NUM9 610 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 ADGRG2Q8IZP9 1017 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 FAM120BQ96EK7 910 aaKnown RBP15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 EGLN2Q96KS0 407 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 HERC2P3Q9BVR0 1158 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 ATP13A3Q9H7F0 1226 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 SERHLQ9NQF3 203 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 ABCB8Q9NUT2 735 aa15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 PNMA8BQ9ULN7 279 aaPredicted RBP15.84■□□□□ 0.13
NKX3-1-201ENST00000380871 TRBV5-3A0A0A0MS03 114 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 MYO1GB0I1T2 1018 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 GAPDHSO14556 408 aaPredicted RBP15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 NADKO95544 446 aaPredicted RBP15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 LRG1P02750 347 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 BMP4P12644 408 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 PSMA3P25788 255 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 NRIP1P48552 1158 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 OCA2Q04671 838 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 DSG4Q86SJ6 1040 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 RNF175Q8N4F7 328 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 C2orf49Q9BVC5 232 aaPredicted RBP15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 ACPTQ9BZG2 426 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 GPRC5BQ9NZH0 403 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 B3GNT3Q9Y2A9 372 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 NAALAD2Q9Y3Q0 740 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 PCDHGA10Q9Y5H3 936 aa15.83■□□□□ 0.13
NKX3-1-201ENST00000380871 SCELO95171 688 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 ITGB8P26012 769 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 PSMB9P28065 219 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 GSSP48637 474 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 CACNG1Q06432 222 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 GBX1Q14549 363 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 AADATQ8N5Z0 425 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 CPPED1Q9BRF8 314 aaPredicted RBP15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 ZDHHC6Q9H6R6 413 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 TMEM45AQ9NWC5 275 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 PER2O15055 1255 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 PGLSO95336 258 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 CLK3P49761 638 aaKnown RBP15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 GZMMP51124 257 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF846Q147U1 533 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 ARHGEF6Q15052 776 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 NPTX1Q15818 432 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 USP39Q53GS9 565 aaKnown RBP15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 DGKKQ5KSL6 1271 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 CACHD1Q5VU97 1274 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 CPZQ66K79 652 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 TPGS2Q68CL5 300 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 ZDHHC21Q8IVQ6 265 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 CADM3Q8N126 398 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 CD244Q9BZW8 370 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 RASSF1Q9NS23 344 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 SLCO3A1Q9UIG8 710 aa15.83■□□□□ 0.12
NKX3-1-201ENST00000380871 MYOFQ9NZM1 2061 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 IFRD1O00458 451 aaPredicted RBP15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 MANBAO00462 879 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 TGM5O43548 720 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 GABARAPO95166 117 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 IL6P05231 212 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 DAPP51397 102 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 RAB15P59190 212 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 ARHGEF7Q14155 803 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF697Q5TEC3 545 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 VTCN1Q7Z7D3 282 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 PIH1D2Q8WWB5 315 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 ULK4Q96C45 1275 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 IL21Q9HBE4 155 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 IL26Q9NPH9 171 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 C1orf109Q9NX04 203 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms