RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 IL12RB2Q99665 862 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 FBXW2Q9UKT8 454 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CARD8Q9Y2G2 431 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 MYO5AQ9Y4I1 1855 aaKnown RBP14.68□□□□□ -0.06
NPHP4-201ENST00000378156 GPC6Q9Y625 555 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-201ENST00000378156 MYH14Q7Z406 1995 aaKnown RBP14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CLDN4O14493 209 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CYBAP13498 195 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 STXBP1P61764 594 aaKnown RBP14.68□□□□□ -0.06
NPHP4-201ENST00000378156 AKIRIN2Q53H80 203 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 PRR23BQ6ZRT6 265 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 C17orf50Q8WW18 174 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 NSMCE3Q96MG7 304 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 BHMG1C9JSJ3 638 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-201ENST00000378156 hCG_2039718K7EN88 272 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 LAMP2P13473 410 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 ACP5P13686 325 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 ITPKBP27987 946 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CTSKP43235 329 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 GSK3BP49841 420 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 ADAM17P78536 824 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 RUNDC3AQ59EK9 446 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CEP97Q8IW35 865 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 SLC34A3Q8N130 599 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 EFCAB11Q9BUY7 163 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 SNNO75324 88 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 IFNW1P05000 195 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 SEPHS1P49903 392 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 PLEKHG6Q3KR16 790 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 RAD9AQ99638 391 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 SLC32A1Q9H598 525 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 ADAMTS6Q9UKP5 1117 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 SNX7Q9UNH6 387 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 PLCH1Q4KWH8 1693 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 SDHDO14521 159 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 SCN2BO60939 215 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 DHRS4L1P0CG22 281 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 ATP1B2P14415 290 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 ZNF24P17028 368 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 YAP1P46937 504 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 OMPP47874 163 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 BLKP51451 505 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 UFM1P61960 85 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 PPP1R8Q12972 351 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 RABL3Q5HYI8 236 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 MORN1Q5T089 497 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 LRRC66Q68CR7 880 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 RASSF6Q6ZTQ3 369 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 ZNF248Q8NDW4 579 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 TMEM174Q8WUU8 243 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 HAVCR1Q96D42 359 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 TMCO6Q96DC7 493 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 C1GALT1C1Q96EU7 318 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 GPATCH1Q9BRR8 931 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 SMG9Q9H0W8 520 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 EDDM13A0A1B0GTR0 161 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 MBLAC1A4D2B0 266 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 RB1P06400 928 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 RAP2AP10114 183 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 ALAS2P22557 587 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 DNAJB1P25685 340 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 NFKB2Q00653 900 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 PDCD4Q53EL6 469 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 OR52J3Q8NH60 311 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 TMEM74Q96NL1 305 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 PSKH2Q96QS6 385 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 RAB11FIP5Q9BXF6 653 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 MRTO4Q9UKD2 239 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 LCHNA4D1U4 455 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 H3BSA7 217 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 FABP3P05413 133 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 HSD17B2P37059 387 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 NRIP1P48552 1158 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 LARS2Q15031 903 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 KLHDC10Q6PID8 442 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 SLC2A7Q6PXP3 512 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 KLHL24Q6TFL4 600 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 FAM129CQ86XR2 697 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 CHCHD6Q9BRQ6 235 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 CARS2Q9HA77 564 aaKnown RBP14.67□□□□□ -0.06
NPHP4-201ENST00000378156 BAIAP2Q9UQB8 552 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 HEBP2Q9Y5Z4 205 aa14.67□□□□□ -0.06
NPHP4-201ENST00000378156 TP73O15350 636 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 CHST10O43529 356 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 FAM189A1O60320 539 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 IL4RP24394 825 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 GJA5P36382 358 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 HSPB3Q12988 150 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 TRIM74Q86UV6 250 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 TRIM73Q86UV7 250 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 ZZZ3Q8IYH5 903 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 RBM18Q96H35 190 aaKnown RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 DUSP26Q9BV47 211 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 PDE10AQ9Y233 779 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 PCDHGA10Q9Y5H3 936 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 PSIP1O75475 530 aaKnown RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 MYCLP1P12525 358 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 C1QTNF8P60827 252 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 PRR5P85299 388 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms