RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CD160O95971 181 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 C1QAP02745 245 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PVRP15151 417 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FASP25445 335 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 CLCN4P51793 760 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 UBE3AQ05086 875 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 DBPQ10586 325 aaPredicted RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF805Q5CZA5 627 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 LDLRAP1Q5SW96 308 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TIFABQ6ZNK6 161 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 KBTBD2Q8IY47 623 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 SFRP1Q8N474 314 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 KCNJ9Q92806 393 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 GLYATL1Q969I3 302 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TIFAQ96CG3 184 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 EXOSC4Q9NPD3 245 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 EHD3Q9NZN3 535 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ANGPT4Q9Y264 503 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 DLGAP4Q9Y2H0 992 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 DHRS7Q9Y394 339 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TESMINQ9Y4I5 508 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PIAS3Q9Y6X2 628 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 A8MUA0 341 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 EI24O14681 340 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 PRAMEF10O60809 474 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 OR6B1O95007 311 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CST1P01037 141 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CTSLP07711 333 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TIMP2P16035 220 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 KIR3DL1P43629 444 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MAPK8P45983 427 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SLC18A1P54219 525 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 OR4D2P58180 307 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 EPS8Q12929 822 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 WASHC2DQ5SRD0 308 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 PDE12Q6L8Q7 609 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SH2D5Q6ZV89 423 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 THOC6Q86W42 341 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SFTPA2Q8IWL1 248 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TERB1Q8NA31 727 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 OR2T11Q8NH01 316 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CCL4L1Q8NHW4 92 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 RDH11Q8TC12 318 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CLP1Q92989 425 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 F2RL3Q96RI0 385 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 BBS4Q96RK4 519 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TUBGCP5Q96RT8 1024 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 INPP5KQ9BT40 448 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 GPR174Q9BXC1 333 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 C1QTNF1Q9BXJ1 281 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MKRN2Q9H000 416 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TUBB1Q9H4B7 451 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SSU72Q9NP77 194 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 FETUBQ9UGM5 382 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SNX6Q9UNH7 406 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 NEU3Q9UQ49 428 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 FAM32AQ9Y421 112 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TNPO3Q9Y5L0 923 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 STON1Q9Y6Q2 735 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 OR2W5A6NFC9 320 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 FADS2P1A8MWK0 482 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 H3BSH0 61 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MAGEC1O60732 1142 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 APOL3O95236 402 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 KCNH1O95259 989 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 GSRP00390 522 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 C1SP09871 688 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 FAM163BP0C2L3 166 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 UROSP10746 265 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 COL6A2P12110 1019 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MTHFD2P13995 350 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 IDO1P14902 403 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 POLR2CP19387 275 aaPredicted RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CCNA2P20248 432 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 ATP6V1E1P36543 226 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 DPP6P42658 865 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MAGEA6P43360 314 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 GSK3BP49841 420 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CAMK1Q14012 370 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 INO80DQ53TQ3 878 aaPredicted RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 IRGCQ6NXR0 463 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TXNDC11Q6PKC3 985 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 RRM2BQ7LG56 351 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 C17orf64Q86WR6 236 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 RASGEF1AQ8N9B8 481 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 VPS37AQ8NEZ2 397 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 RPLP0P6Q8NHW5 317 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 LCN9Q8WX39 176 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 LRRC58Q96CX6 371 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF599Q96NL3 588 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 RTKNQ9BST9 563 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 HERC2P3Q9BVR0 1158 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 REXO4Q9GZR2 422 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TFB2MQ9H5Q4 396 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SMURF2Q9HAU4 748 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 INTS10Q9NVR2 710 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TCRBV21S2A2A0A5A6 115 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 H3BN98 237 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 M0R129 80 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 TRIM38O00635 465 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms