RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OPRL1P41146 370 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 DSC3Q14574 896 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SPANXN4Q5MJ08 99 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 YAF2Q8IY57 180 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 TMEM80Q96HE8 168 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 POLR2J2Q9GZM3 115 aaKnown RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 TRAV19A0A0A6YYK7 116 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 MANSC4A6NHS7 340 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 NUAK1O60285 661 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 UPK1BO75841 260 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ATE1O95260 518 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 RYKP34925 604 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 FAUP35544 74 aaKnown RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 TUBB3Q13509 450 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 LARP4Q71RC2 724 aaKnown RBP eCLIP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 CHST9Q7L1S5 443 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 C16orf62Q7Z3J2 963 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 TRAPPC5Q8IUR0 188 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 UMODL1-AS1Q8N2C9 162 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 CLIP4Q8N3C7 705 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SCAMP5Q8TAC9 235 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 KCNN1Q92952 543 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ERLEC1Q96DZ1 483 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 PPP1R16AQ96I34 528 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 FRMD6Q96NE9 622 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SLC30A3Q99726 388 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 TPK1Q9H3S4 243 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 KLHL31Q9H511 634 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SMURF1Q9HCE7 757 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ABCB9Q9NP78 766 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ERVW-1Q9UQF0 538 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 H0YC42 278 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 MT-ND2P03891 347 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 BMP7P18075 431 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 CAPN3P20807 821 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF10P21506 573 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 PRKACGP22612 351 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 HSF2Q03933 536 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 GK3PQ14409 553 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 UTS2BQ765I0 119 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 BEND5Q7L4P6 421 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 FAM220AQ7Z4H9 259 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 GPR150Q8NGU9 434 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 BTN2A2Q8WVV5 523 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SMAD5Q99717 465 aaKnown RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 IRF2BPLQ9H1B7 796 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 CRTAC1Q9NQ79 661 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 OARD1Q9Y530 152 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 OR6C70A6NIJ9 312 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ACOT8O14734 319 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 KDELR3O43731 214 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 FOXD2O60548 495 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 BCAS1O75363 584 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 RETP07949 1114 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 OR4Q2P0C623 313 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 PSKH1P11801 424 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 BUD31P41223 144 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 GNG2P59768 71 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 HMGCS1Q01581 520 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 MAB21L1Q13394 359 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 WSCD2Q2TBF2 565 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 OR4F3Q6IEY1 312 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 FBXL22Q6P050 247 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 TMPRSS11BQ86T26 416 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 C10orf53Q8N6V4 93 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 VANGL1Q8TAA9 524 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SUSD3Q96L08 255 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 WDR83Q9BRX9 315 aaKnown RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 RNF38Q9H0F5 515 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 INTS7Q9NVH2 962 aaKnown RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ANKMY1Q9P2S6 941 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 VPS29Q9UBQ0 182 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 PRAMEF33A0A0G2JMD5 474 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 CCRL2O00421 344 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 ENPP3O14638 875 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PRAMEF10O60809 474 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 NME6O75414 186 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PEPDP12955 493 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 XKP51811 444 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 AP1S2P56377 157 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SH3BP2P78314 561 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 HEPACAMQ14CZ8 416 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PRAMEF19Q5SWL8 479 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PM20D1Q6GTS8 502 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 CCDC36Q8IYA8 594 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 NSUN5Q96P11 429 aaKnown RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 HEPHQ9BQS7 1158 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 HERC2P3Q9BVR0 1158 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 C7orf72A4D263 438 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 GRM6O15303 877 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 IFNA7P01567 189 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF26P17031 533 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 GMPRP36959 345 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms