RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 APIPQ96GX9 242 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 ZNF641Q96N77 438 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-202ENST00000376839 ZNF300Q96RE9 604 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-202ENST00000376839 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 SLC29A3Q9BZD2 475 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 OR51B4Q9Y5P0 310 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 GLYATL1P3A0A0U1RQE8 302 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 UPK3BL1B0FP48 263 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 UPK3BL2E5RIL1 263 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 RFXANKO14593 260 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 SLC22A1O15245 554 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 TRBC1P01850 177 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 JUNDP17535 347 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 HOXA9P31269 272 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 VLDLRP98155 873 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 PRKCZQ05513 592 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 CLCA4Q14CN2 919 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 KDM4DQ6B0I6 523 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 TSPAN33Q86UF1 283 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 P2RY8Q86VZ1 359 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 BEND7Q8N7W2 519 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-202ENST00000376839 SETD9Q8NE22 299 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 RPL3LQ92901 407 aaKnown RBP12.87□□□□□ -0.35
ACTN1-202ENST00000376839 GABARAPL1Q9H0R8 117 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 RMND5AQ9H871 391 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 RDH14Q9HBH5 336 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 ARL15Q9NXU5 204 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 GMPPBQ9Y5P6 360 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 SCN8AQ9UQD0 1980 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 SEC24AO95486 1093 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 PRKAR2AP13861 404 aaKnown RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ELNP15502 786 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 OR1D2P34982 312 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 HALP42357 657 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 SMARCB1Q12824 385 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 DNASE1L3Q13609 305 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 INAQ16352 499 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 CDKN3Q16667 212 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ZCCHC8Q6NZY4 707 aaKnown RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 CCDC71Q8IV32 467 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 DYNC2LI1Q8TCX1 351 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 PYCR2Q96C36 320 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 APOLD1Q96LR9 279 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 KLF16Q9BXK1 252 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 THG1LQ9NWX6 298 aaKnown RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 SAMD4AQ9UPU9 718 aaKnown RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 H7C4K7 107 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 CCNDBP1O95273 360 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ANXA5P08758 320 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 RPIAP49247 311 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 RPS3AP61247 264 aaKnown RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 CAP1Q01518 475 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 PLD1Q13393 1074 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 KEAP1Q14145 624 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 SYT6Q5T7P8 510 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 NCCRP1Q6ZVX7 275 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ZSWIM9Q86XI8 627 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 APCDD1Q8J025 514 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ZNF540Q8NDQ6 660 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 DNAJB8Q8NHS0 232 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 DPH2Q9BQC3 489 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 EBPLQ9BY08 206 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 SLC32A1Q9H598 525 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ELOVL6Q9H5J4 265 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 NECTIN3Q9NQS3 549 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 AASDHPPTQ9NRN7 309 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 RASSF1Q9NS23 344 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 PDP1Q9P0J1 537 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-202ENST00000376839 ERVK-11Q9UQG0 969 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 TPRKBQ9Y3C4 175 aa12.86□□□□□ -0.35
ACTN1-202ENST00000376839 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 GALTP07902 379 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 CST5P28325 142 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-202ENST00000376839 ACLYP53396 1101 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 AP1S1P61966 158 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 ADCK1Q86TW2 530 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 CADM3Q8N126 398 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 NXPE1Q8N323 547 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 TTC29Q8NA56 475 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-202ENST00000376839 C2orf15Q8WU43 125 aaKnown RBP12.85□□□□□ -0.35
ACTN1-202ENST00000376839 ALG14Q96F25 216 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 HTATIP2Q9BUP3 242 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 SIRT5Q9NXA8 310 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-202ENST00000376839 PRPS2P11908 318 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 KRT20P35900 424 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 EIF2B2P49770 351 aaKnown RBP12.85□□□□□ -0.35
ACTN1-202ENST00000376839 FCGRTP55899 365 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 DGUOKQ16854 277 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 NEK5Q6P3R8 708 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 HOMEZQ8IX15 550 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 PCSK9Q8NBP7 692 aaKnown RBP12.85□□□□□ -0.35
ACTN1-202ENST00000376839 GPR26Q8NDV2 337 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 OR6Q1Q8NGQ2 317 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms