RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	GAL3ST4	Q96RP7	486 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	PKP4	Q99569	1192 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TXLNGY	Q9BZA5	131 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC32A1	Q9H598	525 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	ARNT2	Q9HBZ2	717 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	BCAP29	Q9UHQ4	241 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TAGLN3	Q9UI15	199 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SNX13	Q9Y5W8	968 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	JUN	P05412	331 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	KRT16	P08779	473 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	FGF3	P11487	239 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	POU1F1	P28069	291 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	FEN1	P39748	380 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	YAP1	P46937	504 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SH3BP2	P78314	561 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	VAC14	Q08AM6	782 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	FCHO2	Q0JRZ9	810 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	GRB7	Q14451	532 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TECRL	Q5HYJ1	363 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TMIE	Q8NEW7	156 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	MRGPRX3	Q96LB0	322 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	ADAP2	Q9NPF8	381 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	GID8	Q9NWU2	228 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	KCNK4	Q9NYG8	393 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	ENTPD4	Q9Y227	616 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	PRSS38	A1L453	326 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	HMX2	A2RU54	273 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568		E7EQ34	232 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568		K7EQS6	105 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TRAFD1	O14545	582 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	HTRA2	O43464	458 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	PRAMEF10	O60809	474 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	ZNF217	O75362	1048 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC7A2	P52569	658 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	MRPS22	P82650	360 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	STX4	Q12846	297 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	BNIP3	Q12983	259 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC13A2	Q13183	592 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TMIGD1	Q6UXZ0	262 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	GPR180	Q86V85	440 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SPATS2	Q86XZ4	545 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	FRS2	Q8WU20	508 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC2A4RG	Q9NR83	387 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	ARID2	Q68CP9	1835 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568		A0A0G2JMZ2	1700 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SLCO1B7	G3V0H7	640 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	BIRC5	O15392	142 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	NME6	O75414	186 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	NT5E	P21589	574 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	STEAP4	Q687X5	459 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	RTL10	Q7L3V2	364 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SYVN1	Q86TM6	617 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	ZDHHC1	Q8WTX9	485 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	VMP1	Q96GC9	406 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	VPS50	Q96JG6	964 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	C20orf27	Q9GZN8	174 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568		A8MUI8	341 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	ENTPD5	O75356	428 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC18A2	Q05940	514 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	RGS1	Q08116	209 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	DOC2A	Q14183	400 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	SNCB	Q16143	134 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	UNC50	Q53HI1	259 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	OR5M3	Q8NGP4	307 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	MAPK15	Q8TD08	544 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	ZNF212	Q9UDV6	495 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	CROT	Q9UKG9	612 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	THSD7B	Q9C0I4	1608 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	RFXANK	O14593	260 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	COX4I1	P13073	169 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	EEF1B2	P24534	225 aa	Known RBP	13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	KLF10	Q13118	480 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	RASGRP3	Q8IV61	690 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	DCUN1D3	Q8IWE4	304 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	ETFBKMT	Q8IXQ9	262 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	RCBTB1	Q8NDN9	531 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	SMPDL3A	Q92484	453 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	PLEKHG4B	Q96PX9	1271 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	INSM2	Q96T92	566 aa	Predicted RBP	13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	DERL2	Q9GZP9	239 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568		U3KQV3	271 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	XIRP2	A4UGR9	3374 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	MROH6	A6NGR9	719 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	PATE3	B3GLJ2	98 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	LIN7A	O14910	233 aa	Predicted RBP	13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC35G6	P0C7Q6	338 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	FDXR	P22570	491 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	MTPN	P58546	118 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	KLHL35	Q6PF15	583 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	C10orf53	Q8N6V4	93 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	CCDC138	Q96M89	665 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	TUBB6	Q9BUF5	446 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	INTS7	Q9NVH2	962 aa	Known RBP	13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	VTI1B	Q9UEU0	232 aa		13.13	□□□□□ -0.31
DDR1-225	ENST00000376568	PRAMEF26	H0Y7S4	382 aa		13.12	□□□□□ -0.31

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