RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 SOX14O95416 240 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 C8GP07360 202 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 SRCP12931 536 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 CD36P16671 472 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 CSTF2P33240 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL4A1-201ENST00000375820 CDH15P55291 814 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 LIN52Q52LA3 116 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 OR4F3Q6IEY1 312 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 PAQR3Q6TCH7 311 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 JAGN1Q8N5M9 183 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 CNTD1Q8N815 330 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 DTX3Q8N9I9 347 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 SH3RF2Q8TEC5 729 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 SMG9Q9H0W8 520 aaKnown RBP13.41□□□□□ -0.26
COL4A1-201ENST00000375820 TRPV4Q9HBA0 871 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF541Q9H0D2 1346 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 BCL9O00512 1426 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 B4GALT2O60909 372 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ENGP17813 658 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ZMYND11Q15326 602 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 TMED4Q7Z7H5 227 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 KREMEN2Q8NCW0 462 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 IL1RAPQ9NPH3 570 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 TMEM98Q9Y2Y6 226 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ASLP04424 464 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 RB1P06400 928 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 MSX1P28360 303 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 BNIP1Q12981 228 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 TAS2R7Q9NYW3 318 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 TAC3Q9UHF0 121 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 FXYD6-FXYD2A0A087WZ82 144 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 M0R036 132 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ERI3O43414 337 aaKnown RBP13.41□□□□□ -0.26
COL4A1-201ENST00000375820 OR2B6P58173 313 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 SYPL2Q5VXT5 272 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 NFKBIDQ8NI38 313 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF285Q96NJ3 590 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 FXYD6Q9H0Q3 95 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 EHD1Q9H4M9 534 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 ZCCHC3Q9NUD5 404 aaKnown RBP13.41□□□□□ -0.26
COL4A1-201ENST00000375820 COL1A2P08123 1366 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 GAD2Q05329 585 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 IQCCQ4KMZ1 466 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 HSDL2Q6YN16 418 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 USP43Q70EL4 1123 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
COL4A1-201ENST00000375820 HMGN2P46Q86SG4 172 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 OR8S1Q8NH09 359 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 PCDH19Q8TAB3 1148 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 PRICKLE1Q96MT3 831 aaPredicted RBP13.41□□□□□ -0.26
COL4A1-201ENST00000375820 MAGEH1Q9H213 219 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 KLRF1Q9NZS2 232 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 NOX1Q9Y5S8 564 aa13.41□□□□□ -0.26
COL4A1-201ENST00000375820 CARNS1A5YM72 827 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 PPEF2O14830 753 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 MPZL2O60487 215 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 LDOC1O95751 146 aaPredicted RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 SDR16C5Q8N3Y7 309 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 SUN5Q8TC36 379 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 LRRC20Q8TCA0 184 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 HCAR2Q8TDS4 363 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ANKHQ9HCJ1 492 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF226Q9NYT6 803 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 TMEM150CB9EJG8 249 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 DNM1LO00429 736 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ORC5O43913 435 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CHRNB2P17787 502 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 NSG1P42857 185 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 DSG2Q14126 1118 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 MARCH9Q86YJ5 346 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 SVOPLQ8N434 492 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CEP76Q8TAP6 659 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ACBD6Q9BR61 282 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 FARSBQ9NSD9 589 aaKnown RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 A0A1W2PRQ8 180 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 TMEM88BA6NKF7 163 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CD2P06729 351 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF3P17036 446 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ITIH1P19827 911 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 GDI1P31150 447 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 GDF5P43026 501 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CRISP3P54108 245 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CCL14Q16627 93 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 GXYLT1Q4G148 440 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 METTL21CQ5VZV1 264 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 C4orf32Q8N8J7 132 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 DENND6BQ8NEG7 585 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 OR8K3Q8NH51 312 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ERMAPQ96PL5 475 aaPredicted RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 LDAHQ9H6V9 325 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 GNG8Q9UK08 70 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 SLC22A14Q9Y267 594 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 BLOC1S5-TXNDC5H3BN57 136 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 GNAZP19086 355 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 MPIP34949 423 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 NDST2P52849 883 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms