RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TMED5Q9Y3A6 229 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 PFDN6O15212 129 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 RAD51BO15315 384 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 RGS10O43665 173 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 RECQL5O94762 991 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 LRATO95237 230 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 ALDH7A1P49419 539 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 C1orf53Q5VUE5 145 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 ATG9BQ674R7 924 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 PTRHD1Q6GMV3 140 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 AHSA2Q719I0 299 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 FKBP9P1Q75LS8 142 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 ADAMTSL2Q86TH1 951 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 CCDC71Q8IV32 467 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 TTC29Q8NA56 475 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 SETD9Q8NE22 299 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 MCFD2Q8NI22 146 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 SLX1AQ9BQ83 275 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 TNKS2Q9H2K2 1166 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 FAM220BPB1ANY3 271 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 H0Y626 953 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 TRIM16O95361 564 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 CTPS1P17812 591 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 GSSP48637 474 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 SF3B4Q15427 424 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 USP39Q53GS9 565 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 COLEC12Q5KU26 742 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 CAPN13Q6MZZ7 669 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 VTCN1Q7Z7D3 282 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 ARMC8Q8IUR7 673 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 Q8N9G6 341 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 GLB1L3Q8NCI6 653 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 ZHX1-C8orf76Q96EF9 292 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 TSSK3Q96PN8 268 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 CRISPLD1Q9H336 500 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 RMND5AQ9H871 391 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 ZBTB20Q9HC78 741 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 WWOXQ9NZC7 414 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 PDP1Q9P0J1 537 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 PCDHB5Q9Y5E4 795 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 EFCAB9A8MZ26 197 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 SLC28A1O00337 649 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 MANBAO00462 879 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 TBX1O43435 398 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 F11P03951 625 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 CD9P21926 228 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 TACR1P25103 407 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 HOXA9P31269 272 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 KRT20P35900 424 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 TGFBR2P37173 567 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 EIF2DP41214 584 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 SGSHP51688 502 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 PPP5CP53041 499 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 CPSF6Q16630 551 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 KDM4DQ6B0I6 523 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 OR2T5Q6IEZ7 315 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 DOK6Q6PKX4 331 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 LINC00299Q6ZSB3 139 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 OR2T29Q8NH02 315 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 MAGEH1Q9H213 219 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 ELAC1Q9H777 363 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 TLR8Q9NR97 1041 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 OPTCQ9UBM4 332 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 OSGIN1Q9UJX0 560 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 VPS4AQ9UN37 437 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 PRSS21Q9Y6M0 314 aa13.75□□□□□ -0.21
CLCNKA-202ENST00000375692 CDH23Q9H251 3354 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 OAZ2O95190 189 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 SPNP16150 400 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 PSMA3P25788 255 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 SERPINB1P30740 379 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 SLC11A1P49279 550 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 NEK2P51955 445 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 MAD2L1BPQ15013 274 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 PRSS36Q5K4E3 855 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 DEPDC1Q5TB30 811 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 FAM151BQ6UXP7 276 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 UTS2BQ765I0 119 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 SNX20Q7Z614 316 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 LYSMD2Q8IV50 215 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 PDLIM5Q96HC4 596 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 UROC1Q96N76 676 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 SEPT5Q99719 369 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 CD244Q9BZW8 370 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 H3BNC9 293 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 KDELR3O43731 214 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 PGLSO95336 258 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 ALPIP09923 528 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 PTPN6P29350 595 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 S100A3P33764 101 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 GRK3P35626 688 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 LIPAP38571 399 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 DEFB103AP81534 67 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms