RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 ZNF286BP0CG31 522 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 HLA-DOBP13765 273 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 MAKP20794 623 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CD79BP40259 229 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 IDH3GP51553 393 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 GTF2A2P52657 109 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ARG2P78540 354 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 DHCR24Q15392 516 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RSU1Q15404 277 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RGS21Q2M5E4 152 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ELOA3BQ3SY89 546 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 MARC1Q5VT66 337 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ANGEL2Q5VTE6 544 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF836Q6ZNA1 936 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ARHGAP36Q6ZRI8 547 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 TRAPPC11Q7Z392 1133 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ELOA2Q8IYF1 753 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 COX18Q8N8Q8 333 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 EIF1ADQ8N9N8 165 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ELOA3Q8NG57 546 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 OR51D1Q8NGF3 324 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 OR13C5Q8NGS8 318 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 OR13C2Q8NGS9 318 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 OR2A12Q8NGT7 310 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 BSNDQ8WZ55 320 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 OR14A2Q96R54 314 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 FBXO44Q9H4M3 255 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RBM22Q9NW64 420 aaKnown RBP eCLIP4.55□□□□□ -1.681e-6■■■■■ 27.8
SCN1A-202ENST00000375405 SDHAF2Q9NX18 166 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 B4GALT7Q9UBV7 327 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 STK36Q9NRP7 1315 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 A0A1B0GTH6 734 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 H7C417 338 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 FTH1P02794 183 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 AREGP15514 252 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 AQP1P29972 269 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 GGT2P36268 569 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CDK8P49336 464 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CASP5P51878 434 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 SLC5A3P53794 718 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 SLC35A2P78381 396 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 PTPRRQ15256 657 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 PROSER3Q2NL68 480 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 EMBQ6PCB8 327 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CDHR3Q6ZTQ4 885 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 FAM185AQ8N0U4 392 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RBMXL3Q8N7X1 1067 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 TMIEQ8NEW7 156 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 OR56A4Q8NGH8 313 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 SLC39A7Q92504 469 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 C7orf34Q96L11 122 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF681Q96N22 645 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RANBP3Q9H6Z4 567 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 BARX1Q9HBU1 254 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ACSS2Q9NR19 701 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 TAS2R10Q9NYW0 307 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 KANSL3Q9P2N6 904 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RPL36Q9Y3U8 105 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 EIF4G3O43432 1585 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 IFT140Q96RY7 1462 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 AGAP14A8MT82 685 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 DLX3O60479 287 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CLIC3O95833 236 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 IFNA1P01562 189 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 USP17L7P0C7H9 530 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ITGA2P17301 1181 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 HSPA7P48741 367 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RAB28P51157 221 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 PPP4CP60510 307 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 AAK1Q2M2I8 961 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 TATDN1Q6P1N9 297 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 PAQR7Q86WK9 346 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CLVS1Q8IUQ0 354 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 C3orf58Q8NDZ4 430 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 OR1M1Q8NGA1 313 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 SNIP1Q8TAD8 396 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 MYDGFQ969H8 173 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CERS2Q96G23 380 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 SLC25A44Q96H78 314 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ACTR6Q9GZN1 396 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 NUDT15Q9NV35 164 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 DUS2Q9NX74 493 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 RBMX2Q9Y388 322 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 PCDHA10Q9Y5I2 948 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 INTS1Q8N201 2190 aaKnown RBP4.55□□□□□ -1.68
SCN1A-202ENST00000375405 A0A1W2PRV1 198 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF850A8MQ14 1090 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 TOR1AO14656 332 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 DIRAS3O95661 229 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 FGBP02675 491 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 ITGA2BP08514 1039 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 TRAPPC2P0DI81 140 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 TRAPPC2BP0DI82 140 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 NR2F6P10588 404 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 HTN1P15515 57 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 HDCP19113 662 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 CD9P21926 228 aa4.55□□□□□ -1.68
SCN1A-202ENST00000375405 GNG2P59768 71 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms