RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MEGF11A6BM72 1044 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PHYHO14832 338 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 RPL10P27635 214 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 SLC5A2P31639 672 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PTGIRP43119 386 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PNLIPRP1P54315 467 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 FCRL4Q96PJ5 515 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ENAMQ9NRM1 1142 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 RAD1O60671 282 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 RPLP2P05387 115 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 P2RX3P56373 397 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ATXN7L2Q5T6C5 722 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 DSG4Q86SJ6 1040 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 COQ4Q9Y3A0 265 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 DPEP1P16444 411 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 HTR1EP28566 365 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 LHX1P48742 406 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 MECP2P51608 486 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 PLA2G16P53816 162 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ST3GAL4Q11206 333 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 RAB11BQ15907 218 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 KIAA1324Q6UXG2 1013 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 VTCN1Q7Z7D3 282 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TMEM185AQ8NFB2 350 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 DENND1AQ8TEH3 1009 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 C7orf43Q8WVR3 580 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 NANSQ9NR45 359 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 USP17L3A6NCW0 530 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 USP17L4A6NCW7 530 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TOR1AO14656 332 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SCNN1GP51170 649 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 IFI44LQ53G44 452 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 USP17L1Q7RTZ2 530 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 AGBL3Q8NEM8 1001 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SULT4A1Q9BR01 284 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 POTEKPQ9BYX7 375 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 FAM118AQ9NWS6 357 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SEC14L5O43304 696 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 AGR2O95994 175 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 DDX1Q92499 740 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 SERAC1Q96JX3 654 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TMEM39BQ9GZU3 492 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PTPRJQ12913 1337 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 A0A087WZ62 844 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 A0A1W2PQL4 384 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 RCBTB2O95199 551 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 REP15Q6BDI9 236 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 OR10A6Q8NH74 314 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 CPNE2Q96FN4 548 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZNF641Q96N77 438 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ALG9Q9H6U8 611 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TPT1P8Q9HAU6 139 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PRAMEF2O60811 474 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TATDN3Q17R31 274 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 RNF130Q86XS8 419 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 FCRL1Q96LA6 429 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PDGFDQ9GZP0 370 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 OR52A5Q9H2C5 316 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TAF6LQ9Y6J9 622 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 DCDC2CA8MYV0 355 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SCGB1D1O95968 90 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ALDH1A1P00352 501 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 IFNA5P01569 189 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 BCAT1P54687 386 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SIRPGQ9P1W8 387 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 EBF1Q9UH73 591 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 M0QYT0 321 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 MMP20O60882 483 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 LINC00032P0C843 101 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 JUNBP17275 347 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 HNF1AP20823 631 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 ZNF41P51814 821 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 ARL6IP1Q15041 203 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 UGT8Q16880 541 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 OR10K2Q6IF99 312 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 KCNIP4Q6PIL6 250 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 FRRS1Q6ZNA5 592 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 NELFAQ9H3P2 528 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 TRAV20A0A0B4J274 112 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 GH2P01242 217 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 URODP06132 367 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 SPHARQ15513 63 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 GADL1Q6ZQY3 521 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 RALGPS2Q86X27 583 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 FTMTQ8N4E7 242 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 MEPEQ9NQ76 525 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 TRUB2O95900 331 aaKnown RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 CYB5AP00167 134 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 ZBTB48P10074 688 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 GPX6P59796 221 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 BTG1P62324 171 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 PMS2P3Q13401 168 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 RNF157Q96PX1 679 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 LGR6Q9HBX8 967 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 LAMP5Q9UJQ1 280 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 SPIN1Q9Y657 262 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 ALPPP05187 535 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 DCNP07585 359 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms