RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 ECHDC3Q96DC8 303 aa16.49■□□□□ 0.23
PHF1-202ENST00000374516 CERS4Q9HA82 394 aa16.49■□□□□ 0.23
PHF1-202ENST00000374516 PCDHB1Q9Y5F3 818 aa16.49■□□□□ 0.23
PHF1-202ENST00000374516 SNX5Q9Y5X3 404 aa16.49■□□□□ 0.23
PHF1-202ENST00000374516 PTGES3LE9PB15 166 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 TOR1BO14657 336 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 GSTT2P0CG29 244 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 GSTT2BP0CG30 244 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 GGT1P19440 569 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 CD9P21926 228 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 PCMT1P22061 227 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 NFKBIAP25963 317 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 GP2P55259 537 aaKnown RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 EPS8Q12929 822 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 C18orf21Q32NC0 220 aaPredicted RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 LINC00299Q6ZSB3 139 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 TPRG1Q6ZUI0 275 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 EFL1Q7Z2Z2 1120 aaKnown RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 SNX29P2Q8IUI4 249 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 FNDC5Q8NAU1 212 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 MINDY2Q8NBR6 621 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 OR2A12Q8NGT7 310 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 ZFP90Q8TF47 636 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 S100ZQ8WXG8 99 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 NODALQ96S42 347 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 BRD9Q9H8M2 597 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 CD84Q9UIB8 345 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 MRPS23Q9Y3D9 190 aaKnown RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 COMMD10Q9Y6G5 202 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 CEP290O15078 2479 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 NDUFS2O75306 463 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 PPP2R2BQ00005 443 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 TOP3AQ13472 1001 aaPredicted RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 HABP4Q5JVS0 413 aaKnown RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 PRR23BQ6ZRT6 265 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 USP45Q70EL2 814 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 HS3ST5Q8IZT8 346 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 ZNF366Q8N895 744 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 PJA1Q8NG27 643 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 HGH1Q9BTY7 390 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 UGT2B28Q9BY64 529 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 CARS2Q9HA77 564 aaKnown RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 TMEM45AQ9NWC5 275 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 DNAJB9Q9UBS3 223 aa16.48■□□□□ 0.23
PHF1-202ENST00000374516 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 HELZP42694 1942 aaKnown RBP16.48■□□□□ 0.23
PHF1-202ENST00000374516 GRXCR2A6NFK2 248 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 TTC34A8MYJ7 566 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 AXIN1O15169 862 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 KDM1AO60341 852 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 CA3P07451 260 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ALOX5P09917 674 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 TGM1P22735 817 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ISL1P61371 349 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 KCNAB2Q13303 367 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 POM121L1PQ3SYA9 428 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ANKRD34AQ69YU3 496 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 FAM86B1Q8N7N1 296 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 PIK3C3Q8NEB9 887 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 HPS1Q92902 700 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ZNF707Q96C28 371 aaPredicted RBP16.47■□□□□ 0.23
PHF1-202ENST00000374516 LYSMD1Q96S90 227 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 CGREF1Q99674 301 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 SACM1LQ9NTJ5 587 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 TBC1D14Q9P2M4 693 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 PCTPQ9UKL6 214 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 TRBV5-4A0A0C4DH59 114 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ZNF99A8MXY4 864 aaPredicted RBP16.47■□□□□ 0.23
PHF1-202ENST00000374516 KLK8O60259 260 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 GMNNO75496 209 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 MLYCDO95822 493 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 GUCA1CO95843 209 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 CST1P01037 141 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 HOXA9P31269 272 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 UBE3AQ05086 875 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ATP13A5Q4VNC0 1218 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ZNF362Q5T0B9 420 aaPredicted RBP16.47■□□□□ 0.23
PHF1-202ENST00000374516 AGAP7PQ5VUJ5 663 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 TMC5Q6UXY8 1006 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ADGRD2Q7Z7M1 963 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 NXPE1Q8N323 547 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 ZNF583Q96ND8 569 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 CDK15Q96Q40 435 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 CPEB1Q9BZB8 566 aaKnown RBP16.47■□□□□ 0.23
PHF1-202ENST00000374516 GORASP2Q9H8Y8 452 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 PAK1IP1Q9NWT1 392 aaPredicted RBP16.47■□□□□ 0.23
PHF1-202ENST00000374516 B4GALT6Q9UBX8 382 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 NAALAD2Q9Y3Q0 740 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 TSC22D4Q9Y3Q8 395 aa16.47■□□□□ 0.23
PHF1-202ENST00000374516 LOC100130705A0A1B0GUX0 176 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 ARNTLO00327 626 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
PHF1-202ENST00000374516 POLR2EP19388 210 aaKnown RBP16.46■□□□□ 0.23
PHF1-202ENST00000374516 VIPR2P41587 438 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 RBBP7Q16576 425 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 ENPP6Q6UWR7 440 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 GDPD4Q6W3E5 623 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 Q6ZSR9 355 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 OR7A2PQ8NGA2 310 aa16.46■□□□□ 0.23
PHF1-202ENST00000374516 RBM4BQ9BQ04 359 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms