RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ZNF648Q5T619 568 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ERAP2Q6P179 960 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 SLC30A9Q6PML9 568 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 SUSD1Q6UWL2 747 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 KIAA0907Q7Z7F0 614 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 UBALD2Q8IYN6 164 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 FAM9CQ8IZT9 166 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 DTWD1Q8N5C7 304 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF366Q8N895 744 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 PAPD5Q8NDF8 572 aaKnown RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 TNIP2Q8NFZ5 429 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 OR2T12Q8NG77 320 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 OSCP1Q8WVF1 389 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 TFAP2CQ92754 450 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 BDH2Q9BUT1 245 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 CHID1Q9BWS9 393 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ATG10Q9H0Y0 220 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 CAAP1Q9H8G2 361 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 C8orf4Q9NR00 106 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 DUS2Q9NX74 493 aaKnown RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 MARK1Q9P0L2 795 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ANTXRLA6NF34 631 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 GPR37L1O60883 481 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 MT-ND1P03886 318 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 CTSLP07711 333 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ANXA6P08133 673 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ELFN1P0C7U0 828 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 SLC6A12P48065 614 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 CYP4F3Q08477 520 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ABRQ12979 859 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ACOX1Q15067 660 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 DHCR24Q15392 516 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ATP6AP1Q15904 470 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 FXNQ16595 210 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ZXDCQ2QGD7 858 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 GGTA1PQ4G0N0 100 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 SLC44A4Q53GD3 710 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 HENMT1Q5T8I9 393 aaKnown RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 NEK5Q6P3R8 708 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 DNAJC14Q6Y2X3 702 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 NEK10Q6ZWH5 1172 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 EPHX4Q8IUS5 362 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 RAVER1Q8IY67 606 aaKnown RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 CELF5Q8N6W0 485 aaKnown RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 MFSD2AQ8NA29 543 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 DDHD1Q8NEL9 900 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 OR10A6Q8NH74 314 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 BPIFB1Q8TDL5 484 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 BTN2A2Q8WVV5 523 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 FIG4Q92562 907 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 NXPE3Q969Y0 559 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 TMEM159Q96B96 161 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 LRIG1Q96JA1 1093 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 VPS50Q96JG6 964 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 HAUS8Q9BT25 410 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ANKRD60Q9BZ19 345 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 GRIP2Q9C0E4 1043 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 PRM3Q9NNZ6 103 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 PNPLA3Q9NST1 481 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 KRT87PA6NCN2 255 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 CCDC160A6NGH7 325 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 FADS2P1A8MWK0 482 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 STK25O00506 426 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 TULP3O75386 442 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 RASAL1O95294 804 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 H6PDO95479 791 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 PRPS2P11908 318 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 CDH1P12830 882 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 NELFEP18615 380 aaKnown RBP11.74□□□□□ -0.53
HMGCL-202ENST00000374487 MAPK1P28482 360 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 S100A3P33764 101 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 FCHO2Q0JRZ9 810 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 CHIT1Q13231 466 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 FAM98BQ52LJ0 330 aaKnown RBP11.74□□□□□ -0.53
HMGCL-202ENST00000374487 LDLRAP1Q5SW96 308 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 FRG2Q64ET8 278 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 CWF19L1Q69YN2 538 aaKnown RBP11.74□□□□□ -0.53
HMGCL-202ENST00000374487 L3MBTL4Q8NA19 623 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 FAM47BQ8NA70 645 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 TSPAN14Q8NG11 270 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 CHFRQ96EP1 664 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 MAGEB10Q96LZ2 347 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF583Q96ND8 569 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 FRG2BQ96QU4 278 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 HPS4Q9NQG7 708 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 SLC2A4RGQ9NR83 387 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 INVSQ9Y283 1065 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 DLGAP4Q9Y2H0 992 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 KPNA3O00505 521 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-202ENST00000374487 TSPAN6O43657 245 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 ATG13O75143 517 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 SLCO2B1O94956 709 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 SRPRAP08240 638 aaKnown RBP11.74□□□□□ -0.53
HMGCL-202ENST00000374487 ADH5P11766 374 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF23P17027 643 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 GGT1P19440 569 aa11.74□□□□□ -0.53
HMGCL-202ENST00000374487 NR1H2P55055 460 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms