RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 NOVA1P51513 510 aaKnown RBP19.94■□□□□ 0.78
SYNC-201ENST00000373484 TRAP1Q12931 704 aaKnown RBP19.94■□□□□ 0.78
SYNC-201ENST00000373484 CEACAM7Q14002 265 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 MAPRE2Q15555 327 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 PROX2Q3B8N5 592 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 TBC1D25Q3MII6 688 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 ZCCHC8Q6NZY4 707 aaKnown RBP19.94■□□□□ 0.78
SYNC-201ENST00000373484 CRTC3Q6UUV7 619 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 CHST15Q7LFX5 561 aaPredicted RBP19.94■□□□□ 0.78
SYNC-201ENST00000373484 GLRX5Q86SX6 157 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 TMEM102Q8N9M5 508 aaPredicted RBP19.94■□□□□ 0.78
SYNC-201ENST00000373484 HEXDCQ8WVB3 486 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 NMD3Q96D46 503 aaKnown RBP19.94■□□□□ 0.78
SYNC-201ENST00000373484 VPS39Q96JC1 886 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 MAELQ96JY0 434 aaKnown RBP19.94■□□□□ 0.78
SYNC-201ENST00000373484 BOCQ9BWV1 1114 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 RHOJQ9H4E5 214 aa19.94■□□□□ 0.78
SYNC-201ENST00000373484 KMOO15229 486 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 OR6B1O95007 311 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 KCNK5O95279 499 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 LDOC1O95751 146 aaPredicted RBP19.93■□□□□ 0.78
SYNC-201ENST00000373484 ARNTP27540 789 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 CTSCP53634 463 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 MRPS22P82650 360 aaKnown RBP19.93■□□□□ 0.78
SYNC-201ENST00000373484 TRIP6Q15654 476 aaKnown RBP19.93■□□□□ 0.78
SYNC-201ENST00000373484 KIAA0930Q6ICG6 404 aaPredicted RBP19.93■□□□□ 0.78
SYNC-201ENST00000373484 TRAPPC5Q8IUR0 188 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 TMEM151AQ8N4L1 468 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.93■□□□□ 0.78
SYNC-201ENST00000373484 ASB9Q96DX5 294 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 CCDC97Q96F63 343 aaPredicted RBP19.93■□□□□ 0.78
SYNC-201ENST00000373484 CNDP2Q96KP4 475 aaKnown RBP19.93■□□□□ 0.78
SYNC-201ENST00000373484 OSBPL11Q9BXB4 747 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 GPR34Q9UPC5 381 aa19.93■□□□□ 0.78
SYNC-201ENST00000373484 TARM1B6A8C7 271 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 GIPC1O14908 333 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ACP5P13686 325 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 TUBA4AP68366 448 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 C11orf96Q7Z7L8 435 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 KCNMB4Q86W47 210 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 METTL25Q8N6Q8 603 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 RCN3Q96D15 328 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ZNF514Q96K75 400 aaPredicted RBP19.92■□□□□ 0.78
SYNC-201ENST00000373484 APOLD1Q96LR9 279 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ZNF597Q96LX8 424 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 CATSPERZQ9NTU4 200 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 OR2AG2A6NM03 316 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 CFAP99D6REC4 459 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 TNFSF14O43557 240 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 VAPBO95292 243 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ATP1B2P14415 290 aaPredicted RBP19.92■□□□□ 0.78
SYNC-201ENST00000373484 PAMP19021 973 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 MPSTP25325 297 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ACTR1BP42025 376 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ARCN1P48444 511 aaKnown RBP19.92■□□□□ 0.78
SYNC-201ENST00000373484 KPNA2P52292 529 aaKnown RBP19.92■□□□□ 0.78
SYNC-201ENST00000373484 DNAJB13P59910 316 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ACTR1AP61163 376 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ARL13AQ5H913 290 aaPredicted RBP19.92■□□□□ 0.78
SYNC-201ENST00000373484 LYPLAL1Q5VWZ2 237 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 TMEM220Q6QAJ8 160 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 CERS6Q6ZMG9 384 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 LILRA2Q8N149 483 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 FAM46DQ8NEK8 389 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 BHLHE22Q8NFJ8 381 aaPredicted RBP19.92■□□□□ 0.78
SYNC-201ENST00000373484 ZFP28Q8NHY6 868 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 ITFG2Q969R8 447 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 SGF29Q96ES7 293 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 TIMM29Q9BSF4 260 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 TAAR2Q9P1P5 351 aa19.92■□□□□ 0.78
SYNC-201ENST00000373484 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.92■□□□□ 0.78
SYNC-201ENST00000373484 LY6G6EA0A0G2JKS1 128 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 CD3EAPO15446 510 aaKnown RBP19.91■□□□□ 0.78
SYNC-201ENST00000373484 SGTAO43765 313 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 ZNF23P17027 643 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 ZNF7P17097 686 aaPredicted RBP19.91■□□□□ 0.78
SYNC-201ENST00000373484 HPCAP84074 193 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 STX5Q13190 355 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 SEMA3AQ14563 771 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 DET1Q7L5Y6 550 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 CNTN4Q8IWV2 1026 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 CHERPQ8IWX8 916 aaKnown RBP19.91■□□□□ 0.78
SYNC-201ENST00000373484 MIPOL1Q8TD10 442 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 MARCH4Q9P2E8 410 aaPredicted RBP19.91■□□□□ 0.78
SYNC-201ENST00000373484 SLC23A2Q9UGH3 650 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 DNMT3AQ9Y6K1 912 aaPredicted RBP19.91■□□□□ 0.78
SYNC-201ENST00000373484 AK5Q9Y6K8 562 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 U3KQA8 63 aa19.91■□□□□ 0.78
SYNC-201ENST00000373484 ZNF26P17031 533 aaPredicted RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 CLCNKAP51800 687 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 PLA2G4EQ3MJ16 856 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 BCL7AQ4VC05 210 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 AARS2Q5JTZ9 985 aaKnown RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 OGFOD3Q6PK18 319 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 PIWIL4Q7Z3Z4 852 aaKnown RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 ZC3HC1Q86WB0 502 aaKnown RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 SLC35F3Q8IY50 421 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 EFCAB3Q8N7B9 438 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 PNPLA1Q8N8W4 532 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 CEP70Q8NHQ1 597 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms