RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 LINC00299Q6ZSB3 139 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 MSANTD1Q6ZTZ1 278 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 LRRC70Q7Z2Q7 622 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 PIWIL3Q7Z3Z3 882 aaKnown RBP12.41□□□□□ -0.42
CTPS1-202ENST00000372621 TSPAN33Q86UF1 283 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 SELENOMQ8WWX9 145 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 CMTM7Q96FZ5 175 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 VMP1Q96GC9 406 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 SLC22A12Q96S37 553 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 LYSMD1Q96S90 227 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
CTPS1-202ENST00000372621 AKIP1Q9NQ31 210 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 THG1LQ9NWX6 298 aaKnown RBP12.41□□□□□ -0.42
CTPS1-202ENST00000372621 SAMD4AQ9UPU9 718 aaKnown RBP12.41□□□□□ -0.42
CTPS1-202ENST00000372621 ERVW-1Q9UQF0 538 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 HSPE1-MOB4S4R3N1 261 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
CTPS1-202ENST00000372621 A0A1W2PQ45 241 aaPredicted RBP12.41□□□□□ -0.42
CTPS1-202ENST00000372621 A0A1W2PQY0 241 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 TBKBP1A7MCY6 615 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 ANGPTL1O95841 491 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 FTH1P02794 183 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 ACPPP15309 386 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 NEK2P51955 445 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 MTAPQ13126 283 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 ITGADQ13349 1161 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 CDH18Q13634 790 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 SLC44A4Q53GD3 710 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 GPR155Q7Z3F1 870 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 BTLAQ7Z6A9 289 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 ELMOD1Q8N336 334 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 L3MBTL4Q8NA19 623 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 KLHL23Q8NBE8 558 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 APIPQ96GX9 242 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 RNF186Q9NXI6 227 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 ARL15Q9NXU5 204 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 LRFN2Q9ULH4 789 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 TMED5Q9Y3A6 229 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 PCDHGA10Q9Y5H3 936 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 ORC6Q9Y5N6 252 aa12.41□□□□□ -0.42
CTPS1-202ENST00000372621 SERTM1A2A2V5 107 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 SLC6A12P48065 614 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 CXCR4P61073 352 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 IL5RAQ01344 420 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 LDLRAP1Q5SW96 308 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 DOK6Q6PKX4 331 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 GALNT5Q7Z7M9 940 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 FAM217AQ8IXS0 508 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 FAM9CQ8IZT9 166 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 ZBTB8BQ8NAP8 495 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-202ENST00000372621 ZNF461Q8TAF7 563 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 MCOLN3Q8TDD5 553 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 YIPF6Q96EC8 236 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 EGLN2Q96KS0 407 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 FCRL1Q96LA6 429 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 NEURL2Q9BR09 285 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 TM9SF3Q9HD45 589 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 ERVK-18Q9QC07 812 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 SNX6Q9UNH7 406 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 NPIPB15A6NHN6 443 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-202ENST00000372621 CLDN25C9JDP6 229 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 PRAMEF4O60810 478 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 PTPN5P54829 565 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 PRAMEF9Q5VWM5 478 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 OR2T5Q6IEZ7 315 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 TRIM74Q86UV6 250 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 TRIM73Q86UV7 250 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 SLC22A15Q8IZD6 547 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 SETD9Q8NE22 299 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 OR2T29Q8NH02 315 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 C2orf49Q9BVC5 232 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-202ENST00000372621 SLC12A9Q9BXP2 914 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 YIPF1Q9Y548 306 aa12.4□□□□□ -0.42
CTPS1-202ENST00000372621 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.39□□□□□ -0.43
CTPS1-202ENST00000372621 A8MX80 341 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 E9PQ18 207 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 EIF3FO00303 357 aaPredicted RBP12.39□□□□□ -0.43
CTPS1-202ENST00000372621 RFXANKO14593 260 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 SERPINB7O75635 380 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 PCSK2P16519 638 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 AMD1P17707 334 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 MAPK8P45983 427 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 PPP3CCP48454 512 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 CCR3P51677 355 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 ZNF846Q147U1 533 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 LAPTM4AQ15012 233 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 PGS1Q32NB8 556 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 ADPRMQ3LIE5 342 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 RETSATQ6NUM9 610 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 NEK5Q6P3R8 708 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 CRTC1Q6UUV9 634 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 ELOVL6Q9H5J4 265 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 AASDHPPTQ9NRN7 309 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 ZDHHC3Q9NYG2 299 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 DOLKQ9UPQ8 538 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 ERVK-11Q9UQG0 969 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 IGLV3-16A0A075B6K0 115 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 HOXA2O43364 376 aa12.39□□□□□ -0.43
CTPS1-202ENST00000372621 SCN2BO60939 215 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms