RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CCL14Q16627 93 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 IQCCQ4KMZ1 466 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 ZNF782Q6ZMW2 699 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 THAP5Q7Z6K1 395 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 NRARPQ7Z6K4 114 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 COMMD7Q86VX2 200 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 PLD3Q8IV08 490 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 C10orf107Q8IVU9 208 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 AQP12AQ8IXF9 295 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 CMTR2Q8IYT2 770 aaKnown RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 OR7G3Q8NG95 312 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 FAR1Q8WVX9 515 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 PHF21AQ96BD5 680 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 PLPPR2Q96GM1 343 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 KATNAL1Q9BW62 490 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 NUAK2Q9H093 628 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TBC1D13Q9NVG8 400 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TBC1D24Q9ULP9 559 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 SNX6Q9UNH7 406 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 PCDHGB2Q9Y5G2 931 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TRIP11Q15643 1979 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 CENPFP49454 3210 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 C17orf113A0A1B0GUU1 675 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 FAM149AA5PLN7 773 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 CCDC154A6NI56 674 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 GFRA2O00451 464 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 STX7O15400 261 aaKnown RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 HUS1O60921 280 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 AMHP03971 560 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 SRCP12931 536 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 POU3F2P20265 443 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 ATP6V1B2P21281 511 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 PSMA3P25788 255 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 MAGEA6P43360 314 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 SERPINB9P50453 376 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 BEX3Q00994 111 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 AAK1Q2M2I8 961 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TPRG1LQ5T0D9 272 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 N4BP2L1Q5TBK1 243 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 CXorf57Q6NSI4 855 aaKnown RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TIGD7Q6NT04 549 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 ZNF366Q8N895 744 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 ATOH1Q92858 354 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TMCO6Q96DC7 493 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 SGTBQ96EQ0 304 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 NEDD4LQ96PU5 975 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 MNTQ99583 582 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 CCDC32Q9BV29 185 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 MAGEB5Q9BZ81 275 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 TMEM245Q9H330 911 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 DHX35Q9H5Z1 703 aaKnown RBP8.64□□□□□ -1.03
ATG4A-203ENST00000372232 BFARQ9NZS9 450 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 SUSD2Q9UGT4 822 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 GLS2Q9UI32 602 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 RAB23Q9ULC3 237 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 PDE10AQ9Y233 779 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 RALGAPA2Q2PPJ7 1873 aa8.64□□□□□ -1.03
ATG4A-203ENST00000372232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 DHRS12A0PJE2 317 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 C17orf102A2RUQ5 167 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 E5RI56 91 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 LOC110117498-PIK3R3F6TDL0 507 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 J3QL48 77 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 MED26O95402 600 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 LDOC1O95751 146 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 C2P06681 752 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 WARSP23381 471 aaKnown RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SOX18P35713 384 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 LSM3P62310 102 aaKnown RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 FADDQ13158 208 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PCBP2Q15366 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SGCAQ16586 387 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SETMARQ53H47 684 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 ZMAT1Q5H9K5 638 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SAMD4BQ5PRF9 694 aaKnown RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 C6orf141Q5SZD1 244 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 TXNDC11Q6PKC3 985 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 C16orf62Q7Z3J2 963 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 CDKL3Q8IVW4 592 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 TOP6BLQ8N6T0 577 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PCDH20Q8N6Y1 951 aaKnown RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 B3GALNT2Q8NCR0 500 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 MAGEE2Q8TD90 523 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 LGALS12Q96DT0 336 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 CSPG4P5Q96PW8 444 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 NODALQ96S42 347 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 GAD1Q99259 594 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 CINPQ9BW66 212 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SLC19A3Q9BZV2 496 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SHARPINQ9H0F6 387 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 AP5M1Q9H0R1 490 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SPAG4Q9NPE6 437 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 INTS10Q9NVR2 710 aaKnown RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 ACSL5Q9ULC5 683 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 RPH3AQ9Y2J0 694 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 Q9Y3F1 56 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 DNAH12Q6ZR08 3092 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms