RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SPRED1Q7Z699 444 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 DSG4Q86SJ6 1040 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 NLRP8Q86W28 1048 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 VRK3Q8IV63 474 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 ETFBKMTQ8IXQ9 262 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 SLC22A15Q8IZD6 547 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 SORCS1Q8WY21 1168 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 FCRL1Q96LA6 429 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 UBAP1Q9NZ09 502 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 GPRC5BQ9NZH0 403 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 DEC1Q9P2X7 70 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 SUFUQ9UMX1 484 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 SLC22A14Q9Y267 594 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 KIAA1549LQ6ZVL6 1849 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 MUC22E2RYF6 1773 aaPredicted RBP13.62□□□□□ -0.23
USF1-202ENST00000368020 SLC5A10A0PJK1 596 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 C7orf72A4D263 438 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 KPNA3O00505 521 aaPredicted RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 AHCYL1O43865 530 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 FESP07332 822 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 MTHFD1P11586 935 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 HRH2P25021 359 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 OXTRP30559 389 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 VIPR2P41587 438 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 C21orf58P58505 322 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 PFN3P60673 137 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 CHRNB3Q05901 458 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 FCHO2Q0JRZ9 810 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 CHIT1Q13231 466 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 SKIV2LQ15477 1246 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 HNRNPA1L2Q32P51 320 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 NHSL2Q5HYW2 709 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 SPANXN4Q5MJ08 99 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 GRHL2Q6ISB3 625 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 MTSS1LQ765P7 747 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 BEND7Q8N7W2 519 aaPredicted RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 HM13Q8TCT9 377 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 TFAP2CQ92754 450 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 ELSPBP1Q96BH3 223 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 BIRC7Q96CA5 298 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 REPS1Q96D71 796 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 COQ10AQ96MF6 247 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 LRRC3BQ96PB8 259 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 THUMPD3Q9BV44 507 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 RPF2Q9H7B2 306 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 THG1LQ9NWX6 298 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 ZNHIT2Q9UHR6 403 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 ELOVL7A1L3X0 281 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 OR2AG2A6NM03 316 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 HEPACAM2A8MVW5 462 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 FAM220BPB1ANY3 271 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 H0YIV9 168 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 MBTPS2O43462 519 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 TSPAN6O43657 245 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 MYO1DO94832 1006 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 IL1RNP18510 177 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 NR1H2P55055 460 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 OR4D2P58180 307 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 MTPNP58546 118 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 SRSF11Q05519 484 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 DPTQ07507 201 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 LRRC74AQ0VAA2 488 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 GTF2H3Q13889 308 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 PDGFRLQ15198 375 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 RUNDC3AQ59EK9 446 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 NEK5Q6P3R8 708 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 SUSD1Q6UWL2 747 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 GPR180Q86V85 440 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 THOC6Q86W42 341 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 CBR4Q8N4T8 237 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 RASGEF1AQ8N9B8 481 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 RSPRY1Q96DX4 576 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 SLC29A1Q99808 456 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 DYRK4Q9NR20 520 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 VAPAQ9P0L0 249 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 GMPR2Q9P2T1 348 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 ZNF639Q9UID6 485 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 RUVBL1Q9Y265 456 aaKnown RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 INVSQ9Y283 1065 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 MYRFQ9Y2G1 1151 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 PCDHGA11Q9Y5H2 935 aa13.61□□□□□ -0.23
USF1-202ENST00000368020 KIF26AQ9ULI4 1882 aaPredicted RBP13.61□□□□□ -0.23
USF1-202ENST00000368020 C17orf113A0A1B0GUU1 675 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 ARHGEF33A8MVX0 844 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 SOCS2O14508 198 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 MTX2O75431 263 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 SLC34A2O95436 690 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 H6PDO95479 791 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 RETP07949 1114 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 SMIM18P0DKX4 95 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 AMD1P17707 334 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 ASMTP46597 345 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 TRPC1P48995 793 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 PUS10Q3MIT2 529 aaKnown RBP13.6□□□□□ -0.23
USF1-202ENST00000368020 TANGO2Q6ICL3 276 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 AGTRAPQ6RW13 159 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms