RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CAMKMTQ7Z624 323 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 KRTAP1-3Q8IUG1 177 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 CCDC71Q8IV32 467 aaPredicted RBP13.91□□□□□ -0.18
VAMP4-202ENST00000367740 CLYBLQ8N0X4 340 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 RPRMLQ8N4K4 120 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 SLC25A41Q8N5S1 370 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 FAM57AQ8TBR7 257 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 IMMP1LQ96LU5 166 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 ANKRD10Q9NXR5 420 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 ADAM21Q9UKJ8 722 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 MKL2Q9ULH7 1088 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 ASF1AQ9Y294 204 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 TDRKHQ9Y2W6 561 aaKnown RBP13.91□□□□□ -0.18
VAMP4-202ENST00000367740 A0A0A6YYK5 440 aaPredicted RBP13.9□□□□□ -0.18
VAMP4-202ENST00000367740 AGAP14A8MT82 685 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 DDX3XO00571 662 aaKnown RBP eCLIP13.9□□□□□ -0.188e-6■■■■□ 25.2
VAMP4-202ENST00000367740 FFAR3O14843 346 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 GPR42O15529 346 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 TPOP07202 933 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 MYBL1P10243 752 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 RALBP11234 206 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 ATP1B2P14415 290 aaPredicted RBP13.9□□□□□ -0.18
VAMP4-202ENST00000367740 FBLP22087 321 aaKnown RBP13.9□□□□□ -0.18
VAMP4-202ENST00000367740 EFNA3P52797 238 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 DLX5P56178 289 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 WNT3AP56704 352 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 YBX1P67809 324 aaKnown RBP13.9□□□□□ -0.18
VAMP4-202ENST00000367740 OR1C1Q15619 314 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 FAM214AQ32MH5 1076 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 FCRLBQ6BAA4 426 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 PRMT9Q6P2P2 845 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 PAMR1Q6UXH9 720 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 GALNTL5Q7Z4T8 443 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.9□□□□□ -0.18
VAMP4-202ENST00000367740 CPNE8Q86YQ8 564 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 ZZZ3Q8IYH5 903 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 PLD5Q8N7P1 536 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 TMEM178AQ8NBL3 297 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 KCTD6Q8NC69 237 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 ACRBPQ8NEB7 543 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 TRIM11Q96F44 468 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 SELENOSQ9BQE4 189 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 RASSF1Q9NS23 344 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 FKBPLQ9UIM3 349 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 GNPTGQ9UJJ9 305 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 ARL5AQ9Y689 179 aa13.9□□□□□ -0.18
VAMP4-202ENST00000367740 RCCD1A6NED2 376 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 STX7O15400 261 aaKnown RBP13.89□□□□□ -0.19
VAMP4-202ENST00000367740 TPM2P07951 284 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 ICAM2P13598 275 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 ZNF24P17028 368 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 CD96P40200 585 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
VAMP4-202ENST00000367740 VSX2P58304 361 aaPredicted RBP13.89□□□□□ -0.19
VAMP4-202ENST00000367740 XIAPP98170 497 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 PDK2Q15119 407 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 DEFB113Q30KQ7 82 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 ZC3H12BQ5HYM0 836 aaKnown RBP13.89□□□□□ -0.19
VAMP4-202ENST00000367740 ACER2Q5QJU3 275 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 TMEM211Q6ICI0 200 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 SPINK14Q6IE38 97 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 ZNF571Q7Z3V5 609 aaPredicted RBP13.89□□□□□ -0.19
VAMP4-202ENST00000367740 TBC1D21Q8IYX1 336 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 CPSF7Q8N684 471 aaKnown RBP13.89□□□□□ -0.19
VAMP4-202ENST00000367740 LINC01555Q8NAE3 123 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 OR5K2Q8NHB8 316 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 RND1Q92730 232 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 SEC16BQ96JE7 1060 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 MRGPRX2Q96LB1 330 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 PWWP2AQ96N64 755 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 IP6K2Q9UHH9 426 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 FAM153AQ9UHL3 310 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 POLG2Q9UHN1 485 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 CRLS1Q9UJA2 301 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 ANAPC7Q9UJX3 599 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 EDARQ9UNE0 448 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 HEY1Q9Y5J3 304 aa13.89□□□□□ -0.19
VAMP4-202ENST00000367740 HYKKA2RU49 373 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 A8MUI8 341 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 FAM171A2A8MVW0 826 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 RASGRF2O14827 1237 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 ATE1O95260 518 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 EPOP01588 193 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 CD46P15529 392 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 CDK11BP21127 795 aaKnown RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 ACADLP28330 430 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 PKLRP30613 574 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 CD68P34810 354 aaPredicted RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 PTGS2P35354 604 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 FASTKQ14296 549 aaKnown RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 HADHQ16836 314 aaKnown RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 WASHC2DQ5SRD0 308 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 ZNF449Q6P9G9 518 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 TMEM205Q6UW68 189 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 CDC20BQ86Y33 519 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 LMNTD1Q8N9Z9 388 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 FAM98AQ8NCA5 519 aaKnown RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 OR4K2Q8NGD2 314 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 C10orf90Q96M02 699 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms