RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 KLK4Q9Y5K2 254 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 FITM1A5D6W6 292 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 ZNF839A8K0R7 811 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 E5RI56 91 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 CNOT3O75175 753 aaKnown RBP14.21□□□□□ -0.13
CTSD-202ENST00000367196 VPS26AO75436 327 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 VAPBO95292 243 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 DDAH2O95865 285 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 CTSBP07858 339 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 ERVK-10P10266 1014 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 OGNP20774 298 aaKnown RBP14.21□□□□□ -0.13
CTSD-202ENST00000367196 NMBRP28336 390 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 BDKRB1P46663 353 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 TYSND1Q2T9J0 566 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 KIAA0930Q6ICG6 404 aaPredicted RBP14.21□□□□□ -0.13
CTSD-202ENST00000367196 PRMT9Q6P2P2 845 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 CNSTQ6PJW8 725 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 ZNF285Q96NJ3 590 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 ZNF552Q9H707 407 aaPredicted RBP14.21□□□□□ -0.13
CTSD-202ENST00000367196 SYBUQ9NX95 663 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 LUZP4Q9P127 313 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 SAMD15Q9P1V8 674 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 FBXL4Q9UKA2 621 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 SOX13Q9UN79 622 aa14.21□□□□□ -0.13
CTSD-202ENST00000367196 PCSK5Q92824 1860 aa14.21□□□□□ -0.14
CTSD-202ENST00000367196 TCP11X1B4DZS4 312 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 PRPF4O43172 522 aaKnown RBP eCLIP14.2□□□□□ -0.147e-7■■■□□ 14.8
CTSD-202ENST00000367196 PRICKLE3O43900 615 aaPredicted RBP14.2□□□□□ -0.14
CTSD-202ENST00000367196 CEP104O60308 925 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 CHRM3P20309 590 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 MGAT1P26572 445 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 CMPK1P30085 196 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 HSD17B2P37059 387 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 GRIA3P42263 894 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 CARSP49589 748 aaKnown RBP14.2□□□□□ -0.14
CTSD-202ENST00000367196 VSX2P58304 361 aaPredicted RBP14.2□□□□□ -0.14
CTSD-202ENST00000367196 OCA2Q04671 838 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 ELOAQ14241 798 aaKnown RBP14.2□□□□□ -0.14
CTSD-202ENST00000367196 RBBP7Q16576 425 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 NKG7Q16617 165 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 TUBB8Q3ZCM7 444 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 ANKRD20A4Q4UJ75 823 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 CTSL3PQ5NE16 218 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 WASHC2DQ5SRD0 308 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 PRAMEF13Q5VWM6 474 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 CASC4Q6P4E1 433 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 RNF44Q7L0R7 432 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 OR2L3Q8NG85 312 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 LPGAT1Q92604 370 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 MFSD3Q96ES6 412 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 SPSB2Q99619 263 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 MIPEPQ99797 713 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 SLC22A11Q9NSA0 550 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 INTS10Q9NVR2 710 aaKnown RBP14.2□□□□□ -0.14
CTSD-202ENST00000367196 NFS1Q9Y697 457 aa14.2□□□□□ -0.14
CTSD-202ENST00000367196 ICE1Q9Y2F5 2266 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 CATP04040 527 aaKnown RBP14.19□□□□□ -0.14
CTSD-202ENST00000367196 FMO4P31512 558 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 ARHGAP19Q14CB8 494 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 MUM1Q2TAK8 710 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 TTLL9Q3SXZ7 439 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 PLEKHN1Q494U1 663 aaPredicted RBP14.19□□□□□ -0.14
CTSD-202ENST00000367196 PRR30Q53SZ7 412 aaPredicted RBP14.19□□□□□ -0.14
CTSD-202ENST00000367196 AGAP7PQ5VUJ5 663 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 PPP4R1Q8TF05 950 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 SMPDL3AQ92484 453 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 SNRNP40Q96DI7 357 aaKnown RBP14.19□□□□□ -0.14
CTSD-202ENST00000367196 BIRC8Q96P09 236 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 AGAP4Q96P64 663 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 ZFYVE21Q9BQ24 234 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 CCDC68Q9H2F9 335 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 EPS8L2Q9H6S3 715 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 ZNF304Q9HCX3 659 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 SLC6A20Q9NP91 592 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 AGPAT4Q9NRZ5 378 aa14.19□□□□□ -0.14
CTSD-202ENST00000367196 HIVEP3Q5T1R4 2406 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 A0A0J9YVX5 310 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 MAGEB16A2A368 324 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 HYKKA2RU49 373 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 CTSVO60911 334 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 NIPSNAP2O75323 286 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 MATN4O95460 622 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 MCM3P25205 808 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 ARNTP27540 789 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 PSMB5P28074 263 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 RPA3P35244 121 aaPredicted RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 MAGEA6P43360 314 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 EMP3P54852 163 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 GBX1Q14549 363 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 KCNJ11Q14654 390 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 C4orf17Q53FE4 359 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 Q6ZS92 163 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 COX15Q7KZN9 410 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 CILP2Q8IUL8 1156 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 OR2A1Q8NGT9 310 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 OR9A1PQ8NGU1 263 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 MVB12AQ96EY5 273 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 WDR77Q9BQA1 342 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms