RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RABL3Q5HYI8 236 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR52J3Q8NH60 311 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 INTS7Q9NVH2 962 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 PCDHGC4Q9Y5F7 938 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 EIF3FO00303 357 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 TNNI3P19429 210 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 HSH2DQ96JZ2 352 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CYP2S1Q96SQ9 504 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CARD8Q9Y2G2 431 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CD1DP15813 335 aa11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 FADDQ13158 208 aa11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC15A3Q8IY34 581 aa11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 PGAP3Q96FM1 320 aaPredicted RBP11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 FCRL3Q96P31 734 aaPredicted RBP11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 SMOQ99835 787 aa11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 MOXD2PA6NHM9 499 aa11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 LSM1O15116 133 aaKnown RBP11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 FZD1Q9UP38 647 aa11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZFP37Q9Y6Q3 630 aaPredicted RBP11.52□□□□□ -0.56
CDC42BPA-202ENST00000366764 PTTG1O95997 202 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 IFNA7P01567 189 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 XKP51811 444 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 SLC14A2Q15849 920 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 ZNF367Q7RTV3 350 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 RAB11FIP5Q9BXF6 653 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 DHRS7Q9Y394 339 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 FBP2O00757 339 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 BIKQ13323 160 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 PIM3Q86V86 326 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 CNTN4Q8IWV2 1026 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 TTLL2Q9BWV7 592 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 FAIMQ9NVQ4 179 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 SMOXQ9NWM0 555 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMA7Q9Y2S6 64 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 PDPK1O15530 556 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 DFNA5O60443 496 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 FGF4P08620 206 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 CDKL4Q5MAI5 379 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 SLITRK4Q8IW52 837 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 FIBCD1Q8N539 461 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 POLR2J2Q9GZM3 115 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 KCNH6Q9H252 994 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 MCUBQ9NWR8 336 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 A8MX80 341 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 F2P00734 622 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 SELPP16109 830 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 PRKAG1P54619 331 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 RBBP4Q09028 425 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 HLA-DQA1Q5Y7H0 255 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 ADGRD2Q7Z7M1 963 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 CPNE5Q9HCH3 593 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 CRTAC1Q9NQ79 661 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 AIG1Q9NVV5 245 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 PCDHGB5Q9Y5G0 923 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 PSMD11O00231 422 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 RGS20O76081 388 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 G6PDP11413 515 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 FDXRP22570 491 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 TGFBIQ15582 683 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 GPR65Q8IYL9 337 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 PGBD3Q8N328 593 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 DOCK5Q9H7D0 1870 aa11.52□□□□□ -0.57
CDC42BPA-202ENST00000366764 CHRNA1P02708 482 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 MYRFLQ96LU7 910 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 MTERF1Q99551 399 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 MRPS7Q9Y2R9 242 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 KELP23276 732 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 CRISP3P54108 245 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 CRTC2Q53ET0 693 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 XKR5Q6UX68 686 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 HFE2Q6ZVN8 426 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 NPAS4Q8IUM7 802 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 HBEGFQ99075 208 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 YIPF2Q9BWQ6 316 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR2B2Q9GZK3 357 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 PFDN2Q9UHV9 154 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 HCN4Q9Y3Q4 1203 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 HTR1BP28222 390 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 KANK2Q63ZY3 851 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMEM138Q9NPI0 162 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 SCARB2Q14108 478 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 SERPINA13PQ6UXR4 307 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 ZFAND4Q86XD8 727 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 CHPFQ8IZ52 775 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 CYTH4Q9UIA0 394 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 PCDH7O60245 1069 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 GSTT2BP0CG30 244 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 CD40LGP29965 261 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 SLC43A3Q8NBI5 491 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 ANKRD49Q8WVL7 239 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 TFAP2CQ92754 450 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 ERMAPQ96PL5 475 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 PCYT2Q99447 389 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 SMAD5Q99717 465 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 SLC35A5Q9BS91 424 aa11.51□□□□□ -0.57
CDC42BPA-202ENST00000366764 PIGUQ9H490 435 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms