RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CASP3P42574 277 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 FRKP42685 505 aaPredicted RBP3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 FMO5P49326 533 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 VAMP7P51809 220 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 ST8SIA6P61647 398 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 KLC1Q07866 573 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 LGALS3BPQ08380 585 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 COASYQ13057 564 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PPP2R5CQ13362 524 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 C2orf76Q3KRA6 126 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 CASC4Q6P4E1 433 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 FOXL2NBQ6ZUU3 175 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 RAPH1Q70E73 1250 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 ANKRD33Q7Z3H0 272 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 SLC9B2Q86UD5 537 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 EXOC3L1Q86VI1 746 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 SIAH3Q8IW03 269 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 MMD2Q8IY49 270 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 APCDD1Q8J025 514 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 NDUFAF2Q8N183 169 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 METTL27Q8N6F8 245 aaPredicted RBP3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 AMER3Q8N944 861 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 OR1J1Q8NGS3 322 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 SEPT1Q8WYJ6 367 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PIGBQ92521 554 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 CENPTQ96BT3 561 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 ZBTB9Q96C00 473 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 SLC47A1Q96FL8 570 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 MARK4Q96L34 752 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PRRG4Q9BZD6 226 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 LAT2Q9GZY6 243 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 SNX25Q9H3E2 840 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 SLCO1C1Q9NYB5 712 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PTTG2Q9NZH5 202 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 KNSTRNQ9Y448 316 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 O00370 1275 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CAPN9O14815 690 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 ARPC2O15144 300 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 SNX3O60493 162 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 KINO60870 393 aaKnown RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 RTN2O75298 545 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 T-ENOLP0DO92 83 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 SNHG28P0DPA3 235 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 EPORP19235 508 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 EFNA1P20827 205 aaPredicted RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CA4P22748 312 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 DGKAP23743 735 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CD27P26842 260 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 EPHA2P29317 976 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 TAF10Q12962 218 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 DMP1Q13316 513 aaPredicted RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 RCN2Q14257 317 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 PHKG1Q16816 387 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 FUT11Q495W5 492 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CCDC158Q5M9N0 1113 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CCNYL2Q5T2Q4 361 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 BTNL8Q6UX41 500 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 ANO5Q75V66 913 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 NFE4Q86UQ8 179 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 AMIGO1Q86WK6 493 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 ZDHHC17Q8IUH5 632 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 SAMD14Q8IZD0 417 aaPredicted RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 LGI2Q8N0V4 545 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CLYBLQ8N0X4 340 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 MAPKAPK5-AS1Q8N8E1 139 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 SPC24Q8NBT2 197 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 NCOA7Q8NI08 942 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 LMO3Q8TAP4 145 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 PHLDA1Q8WV24 401 aaPredicted RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 SGF29Q96ES7 293 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 PDLIM5Q96HC4 596 aaKnown RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 THOC3Q96J01 351 aaKnown RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 ST6GAL2Q96JF0 529 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CABS1Q96KC9 395 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 HNRNPABQ99729 332 aaKnown RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 HIPK2Q9H2X6 1198 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 ACTL8Q9H568 366 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 RETREG1Q9H6L5 497 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 TLE6Q9H808 572 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 DBNDD1Q9H9R9 158 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 SDR39U1Q9NRG7 319 aaPredicted RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 FGF21Q9NSA1 209 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 CWC25Q9NXE8 425 aaPredicted RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 FBXL5Q9UKA1 691 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 ACAD8Q9UKU7 415 aa3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 PA2G4Q9UQ80 394 aaKnown RBP3.45□□□□□ -1.86
RNU6-28P-201ENST00000362378 LOC101059948A0A1B0GTJ6 334 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 A0A1B0GUV1 79 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 ANKRD61A6NGH8 418 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 SMTNL1A8MU46 457 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 KBTBD13C9JR72 458 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 C16orf97H3BN30 126 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 GH1P01241 217 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 ANKRD34CP0C6C1 535 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 GP1BBP13224 206 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 CCND3P30281 292 aaPredicted RBP3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 MAZP56270 477 aaKnown RBP3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 UBXN1Q04323 297 aa3.44□□□□□ -1.86
RNU6-28P-201ENST00000362378 CACNG1Q06432 222 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms