RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 VTCN1Q7Z7D3 282 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 LGMNQ99538 433 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 C12orf65Q9H3J6 166 aaKnown RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 BIN3Q9NQY0 253 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 EVPLQ92817 2033 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 C2P06681 752 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 CHMP24386 653 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TSTQ16762 297 aaKnown RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 POMZP3Q6PJE2 187 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 COMMD7Q86VX2 200 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 JPH3Q8WXH2 748 aaPredicted RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 IL12RB2Q99665 862 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 SEMA3CQ99985 751 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 CYTH4Q9UIA0 394 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 PDHXO00330 501 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 RAB36O95755 333 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 NT5EP21589 574 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 GRIA1P42261 906 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ARSKQ6UWY0 536 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ARMC5Q96C12 935 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 MYO19Q96H55 970 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 APOLD1Q96LR9 279 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 RIPOR3Q96MK2 946 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TBX5Q99593 518 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 NUDT4Q9NZJ9 180 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 GSKIPQ9P0R6 139 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TMEM9Q9P0T7 183 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 RHDQ02161 417 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 PAOXQ6QHF9 649 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 KCTD9Q7L273 389 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 FAM71AQ8IYT1 594 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 TMEM145Q8NBT3 493 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 FNDC8Q8TC99 324 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 AGAP2Q99490 1192 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 HERC2P3Q9BVR0 1158 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 PCDHAC1Q9H158 963 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF226Q9NYT6 803 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 COQ3Q9NZJ6 369 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 TIMM22Q9Y584 194 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 LOC100130705A0A1B0GUX0 176 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ARPC2O15144 300 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC22A2O15244 555 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 STK16O75716 305 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 CFL1P23528 166 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 SSX2Q16385 188 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 SGCBQ16585 318 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 TMEM119Q4V9L6 283 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 METTL25Q8N6Q8 603 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 SHDQ96IW2 340 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 INPP4AQ96PE3 977 aaPredicted RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 DEC1Q9P2X7 70 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 CLTCL1P53675 1640 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 MUSKO15146 869 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 CDRT1O95170 752 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 POGLUT1Q8NBL1 392 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF420Q8TAQ5 688 aaPredicted RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 BRSK1Q8TDC3 778 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 KCNN1Q92952 543 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 BEX2Q9BXY8 128 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ACP6Q9NPH0 428 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 LACTBL1A8MY62 500 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 PEX12O00623 359 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ZC3H12AQ5D1E8 599 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 MED27Q6P2C8 311 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 STYXQ8WUJ0 223 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 LIN37Q96GY3 246 aaPredicted RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 KLHL15Q96M94 604 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 AMBNQ9NP70 447 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 TAS2R9Q9NYW1 312 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 OR2AG2A6NM03 316 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 CAPN15O75808 1086 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 UQCRC1P31930 480 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 LUMP51884 338 aaPredicted RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 CACNG1Q06432 222 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 MINDY4Q4G0A6 757 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 NRSN1Q8IZ57 195 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 LRRC52Q8N7C0 313 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ADAM2Q99965 735 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 YARS2Q9Y2Z4 477 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 CLEC3AO75596 197 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 PIRTP0C851 137 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 PRKCHP24723 683 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 NFKB2Q00653 900 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 DAG1Q14118 895 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 OR14K1Q8NGZ2 314 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 C8orf48Q96LL4 319 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 BEX1Q9HBH7 125 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 USP29Q9HBJ7 922 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 TIGARQ9NQ88 270 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 RFPL1O75677 317 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 OXSR1O95747 527 aaPredicted RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 XKP51811 444 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 CHERPQ8IWX8 916 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 RASGEF1CQ8N431 466 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms