RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MTFR2Q6P444 385 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 MFSD2AQ8NA29 543 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 C7orf50Q9BRJ6 194 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ELOVL2Q9NXB9 296 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ERVK-11Q9UQG0 969 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 SH2B3Q9UQQ2 575 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ALAS2P22557 587 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 C12orf40Q86WS4 652 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 LAS2Q8IYD9 372 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 EIF1AYO14602 144 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CAPN3P20807 821 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CCNFP41002 786 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 EIF1AXP47813 144 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF616Q08AN1 781 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TEX44Q53QW1 395 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 FBXL16Q8N461 479 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF781Q8N8C0 355 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 RPLP0P6Q8NHW5 317 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 STON2Q8WXE9 905 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CORO1BQ9BR76 489 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 POMPQ9Y244 141 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 MAGED1Q9Y5V3 778 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 SPATA31A3Q5VYP0 1347 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 AQP12BA6NM10 295 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 H0YGN5 161 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CREBL2O60519 120 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 HLA-DPB1P04440 258 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ZACNQ401N2 412 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TSPAN33Q86UF1 283 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 AQP12AQ8IXF9 295 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 FTMTQ8N4E7 242 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 FAM124BQ9H5Z6 455 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 IFNA17P01571 189 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 QPCTQ16769 361 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 OSTF1Q92882 214 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 LENG8Q96PV6 779 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 GAL3ST4Q96RP7 486 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 EBPLQ9BY08 206 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ABHD16BQ9H3Z7 469 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 RUVBL1Q9Y265 456 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 SCAMP3O14828 347 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CELF2O95319 508 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 BCKDHAP12694 445 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 NSG1P42857 185 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 GAD1Q99259 594 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 HHLA1C9JL84 531 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TLR4O00206 839 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 IL7P13232 177 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 RPS3P23396 243 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 PRKCHP24723 683 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 DUSP26Q9BV47 211 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 LAMP5Q9UJQ1 280 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 AP2A1O95782 977 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 FNTBP49356 437 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 GALNT11Q8NCW6 608 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 OAZ3Q9UMX2 235 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 NINQ8N4C6 2090 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 RAD51DO75771 328 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CXCR1P25024 350 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CHIT1Q13231 466 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF529Q6P280 563 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TUBG2Q9NRH3 451 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 IDSP22304 550 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CDK2P24941 298 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CLEC12AQ5QGZ9 265 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 KIAA1161Q6NSJ0 714 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 SOCS4Q8WXH5 440 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 MFSD3Q96ES6 412 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TBL1XR1Q9BZK7 514 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 FLRT1Q9NZU1 646 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ERVK-19Q9WJR5 959 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 E9PAM4 449 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 INMTO95050 263 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 AKR1A1P14550 325 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 POLR2HP52434 150 aaKnown RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 OR2T5Q6IEZ7 315 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 OR7G2Q8NG99 324 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 OR2T29Q8NH02 315 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SSX3Q99909 188 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 NPIPA5E9PKD4 350 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 GRID2O43424 1007 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 RASGRP1O95267 797 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 MT-ND1P03886 318 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 GTF2F2P13984 249 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 MAXP61244 160 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF829Q3KNS6 432 aaPredicted RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 CHRFAM7AQ494W8 412 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 NPIPA1Q9UND3 350 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 DSG2Q14126 1118 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 GPR151Q8TDV0 419 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 A0A1W2PPM1 405 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF16P17020 682 aaPredicted RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SOX10P56693 466 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SCARB2Q14108 478 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ZDHHC4Q9NPG8 344 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 LGALS13Q9UHV8 139 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TLR5O60602 858 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 C2P06681 752 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 RHDQ02161 417 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms