RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ASH1LQ9NR48 2969 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 TNRC6BQ9UPQ9 1833 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 TAF4O00268 1085 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 TM4SF5O14894 197 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 CLGNO14967 610 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 KDM1AO60341 852 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 UGDHO60701 494 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 TNFP01375 233 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 BCKDHBP21953 392 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 CCND1P24385 295 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 CNR2P34972 360 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 PNLIPRP1P54315 467 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 TBPL1P62380 186 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 ARHGAP19Q14CB8 494 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 KRT72Q14CN4 511 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 ZXDCQ2QGD7 858 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 WASH2PQ6VEQ5 465 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 RNF165Q6ZSG1 346 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 IQCHQ86VS3 1027 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 RGL4Q8IZJ4 473 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 SLC22A18ASQ8N1D0 253 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 DCBLD1Q8N8Z6 715 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 PHC3Q8NDX5 983 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 ZNF480Q8WV37 535 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 GAB3Q8WWW8 586 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 PRR11Q96HE9 360 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 SLC6A18Q96N87 628 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 FERD3LQ96RJ6 166 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 INSM2Q96T92 566 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 RAB11FIP5Q9BXF6 653 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 TMEM121BQ9BXQ6 578 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 MVB12BQ9H7P6 319 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 WASH6PQ9NQA3 447 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 CCDC177Q9NQR7 707 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 IMP3Q9NV31 184 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 RIC8BQ9NVN3 520 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 ARMCX1Q9P291 453 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 CIDEBQ9UHD4 219 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 POLG2Q9UHN1 485 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 GMEB2Q9UKD1 530 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 SLC12A4Q9UP95 1085 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 WDR37Q9Y2I8 494 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 CAPN7Q9Y6W3 813 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 NBEAQ8NFP9 2946 aa13.42□□□□□ -0.26
PDLIM5-203ENST00000359265 CEP295Q9C0D2 2601 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 SPTY2D1-AS1A0A0U1RR47 76 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 SCAMP1O15126 338 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 HNRNPCL1O60812 293 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 KRT6AP02538 564 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 KRT6BP04259 564 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 ERGP11308 486 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 MTHFD1P11586 935 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 EPORP19235 508 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 CD38P28907 300 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 ADSLP30566 484 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 ACTR1BP42025 376 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 KRT6CP48668 564 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 BLKP51451 505 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 ACTR1AP61163 376 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 CTBSQ01459 385 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 ILF3Q12906 894 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 TSTA3Q13630 321 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 UBAP2LQ14157 1087 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 GRB7Q14451 532 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 KRT33BQ14525 404 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 XKR7Q5GH72 579 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 DUS1LQ6P1R4 473 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 MYLK4Q86YV6 388 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 L3MBTL4Q8NA19 623 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 MFSD2AQ8NA29 543 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 PPFIBP2Q8ND30 876 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 SGPP1Q9BX95 441 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 TUBB1Q9H4B7 451 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 SEMA4GQ9NTN9 838 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 RNF11Q9Y3C5 154 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 DYRK1BQ9Y463 629 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 ST14Q9Y5Y6 855 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 CFAP20Q9Y6A4 193 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 KCNE2Q9Y6J6 123 aa13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 ARHGEF17Q96PE2 2063 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-203ENST00000359265 SPAG17Q6Q759 2223 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 SLC22A2O15244 555 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 UNC5CO95185 931 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 LINC00032P0C843 101 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 JUPP14923 745 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 LBPP18428 481 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 NDUFS1P28331 727 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 HTR6P50406 440 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 IRX1P78414 480 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 IRF8Q02556 426 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PCDH1Q08174 1060 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 EIF2B5Q13144 721 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 CHIT1Q13231 466 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PRKG2Q13237 762 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 FZD2Q14332 565 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms