RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 CHODLQ9H9P2 273 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 LIN7CQ9NUP9 197 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 AGPAT5Q9NUQ2 364 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ING3Q9NXR8 418 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 JRKLQ9Y4A0 524 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 MFHAS1Q9Y4C4 1052 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 COL5A1P20908 1838 aaPredicted RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NFASCO94856 1347 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 KLRF2D3W0D1 207 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SMIM18P0DKX4 95 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ITGB8P26012 769 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ASPAP45381 313 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 MAPKAPK2P49137 400 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PSG6Q00889 435 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CHRNEQ04844 493 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 BNIP3Q12983 259 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TRAF1Q13077 416 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 APOFQ13790 326 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 KCNC3Q14003 757 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 USP10Q14694 798 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 EDRF1Q3B7T1 1238 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMEM31Q5JXX7 168 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 FHL5Q5TD97 284 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 MFSD7Q6UXD7 560 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 RIPOR1Q6ZS17 1223 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CD163Q86VB7 1156 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 GATAD2AQ86YP4 633 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CFAP52Q8N1V2 620 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 OR8K5Q8NH50 307 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PEX13Q92968 403 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NUDT11Q96G61 164 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 LTV1Q96GA3 475 aaPredicted RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 THUMPD3Q9BV44 507 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZCCHC4Q9H5U6 513 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 MANSC1Q9H8J5 431 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 VEZTQ9HBM0 779 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 THAP1Q9NVV9 213 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SIGLEC8Q9NYZ4 499 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CIDEBQ9UHD4 219 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLC7A8Q9UHI5 535 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 UMODL1Q5DID0 1318 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CDHR2Q9BYE9 1310 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 DNAH6Q9C0G6 4158 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TRAV34A0A0B4J273 112 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SYN3O14994 580 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 BET1O15155 118 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TTI1O43156 1089 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ARHGEF9O43307 516 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SURF6O75683 361 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 RGS9O75916 674 aaPredicted RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 OR6B1O95007 311 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 OAZ2O95190 189 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 IL1AP01583 271 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 FURINP09958 794 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SRD5A1P18405 259 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 GIFP27352 417 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NDUFS1P28331 727 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ADRA1AP35348 466 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMPOP42166 694 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ALDH18A1P54886 795 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 DAOAP59103 153 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 C1orf61Q13536 156 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 DLG2Q15700 870 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CNGA3Q16281 694 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 USH1GQ495M9 461 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 FAM120AOSQ5T036 256 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 C9orf139Q6ZV77 190 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TRILQ7L0X0 811 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SPPL2CQ8IUH8 684 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SERPINA12Q8IW75 414 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ADGRG5Q8IZF4 528 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 DCLK2Q8N568 766 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 FAM184AQ8NB25 1140 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NR4A3Q92570 626 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 RFKQ969G6 155 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMBIM1Q969X1 311 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 RANBP9Q96S59 729 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CCT7Q99832 543 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZNF670Q9BS34 389 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 POLDIP3Q9BY77 421 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 DPH5Q9H2P9 285 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TDP1Q9NUW8 608 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ATXN10Q9UBB4 475 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ONECUT1Q9UBC0 465 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ACSL5Q9ULC5 683 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 A0A1W2PQJ5 194 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 FAM187AA6NFU0 413 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLCO1B7G3V0H7 640 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TNPO2O14787 897 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 BIRC5O15392 142 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NUDT21O43809 227 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PRAMEF2O60811 474 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 UPP2O95045 317 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 LCA5LO95447 670 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 GAPDHP04406 335 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CYBBP04839 570 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 RAB40ALP0C0E4 278 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 VSIG10L2P0DP72 767 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TOP1P11387 765 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms