RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SERPINA13PQ6UXR4 307 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 GHDCQ8N2G8 530 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 RPLP0P6Q8NHW5 317 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 RIMKLBQ9ULI2 386 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 C2CD4BA6NLJ0 364 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 STMND1H3BQB6 276 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PLA2G16P53816 162 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 TJP1Q07157 1748 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 GANABQ14697 944 aaKnown RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 LRRC66Q68CR7 880 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 OR2L3Q8NG85 312 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 NDC1Q9BTX1 674 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ST6GALNAC4Q9H4F1 302 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SPG21Q9NZD8 308 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PADI2Q9Y2J8 665 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 B8ZZF3 427 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 LYPLA2O95372 231 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PDX1P52945 283 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 CHST4Q8NCG5 386 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 LILRB4Q8NHJ6 448 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 GATA6Q92908 595 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ANKRD60Q9BZ19 345 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PTCH2Q9Y6C5 1203 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 CXorf49A8MYA2 514 aaPredicted RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 MMAAQ8IVH4 418 aaKnown RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 FAM46DQ8NEK8 389 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 OR7G1Q8NGA0 311 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 RERGQ96A58 199 aaPredicted RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PPP1R16AQ96I34 528 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 CAMK1GQ96NX5 476 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 MAPKAP1Q9BPZ7 522 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 EQTNQ9NQ60 294 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 TVP23BQ9NYZ1 205 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 A0A1B0GUL6 1792 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 E9PAM4 449 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 RAB36O95755 333 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ACADMP11310 421 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 LAMP2P13473 410 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ADRA1BP35368 520 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PIK3CBP42338 1070 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 NAE1Q13564 534 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 EIPR1Q53HC9 387 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 KBTBD6Q86V97 674 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 GRIN3AQ8TCU5 1115 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 RAET1EQ8TD07 263 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 S100A16Q96FQ6 103 aaKnown RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 TCEAL7Q9BRU2 100 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PLEKHA1Q9HB21 404 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ENAMQ9NRM1 1142 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PIK3C2AO00443 1686 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 TMEM233B4DJY2 109 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 ATG13O75143 517 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 NDST3O95803 873 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 HSPA7P48741 367 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 ATP4BP51164 291 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PNLIPRP1P54315 467 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 E2F1Q01094 437 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 FGL1Q08830 312 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DPYSL2Q16555 572 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 XKR4Q5GH76 650 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 FAM117BQ6P1L5 589 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 C1orf216Q8TAB5 229 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 XAGE5Q8WWM1 108 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 FCRL2Q96LA5 508 aaPredicted RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PPA2Q9H2U2 334 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TFB2MQ9H5Q4 396 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TNFRSF10DQ9UBN6 386 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 IFT52Q9Y366 437 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PCDHB9Q9Y5E1 797 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 XYLBO75191 536 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 ERAL1O75616 437 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 CHRM5P08912 532 aaPredicted RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DNASE1P24855 282 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 APLP1P51693 650 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 NFE2L1Q14494 772 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 GRK1Q15835 563 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TBC1D25Q3MII6 688 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 INTS6LQ5JSJ4 861 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 UBAP2Q5T6F2 1119 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 UGT2A3Q6UWM9 527 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 BAIAP2L2Q6UXY1 529 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 AQP11Q8NBQ7 271 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 CDADC1Q9BWV3 514 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 C14orf105Q9NVL8 296 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 ECM29Q5VYK3 1845 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 C10orf71Q711Q0 1435 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DDTLA6NHG4 134 aaPredicted RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SLC7A4O43246 635 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 OR4F21O95013 312 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 C4BPAP04003 597 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SPARCP09486 303 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 IL32P24001 234 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DNASE1L1P49184 302 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 RPIAP49247 311 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 GBX2P52951 348 aaPredicted RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 NUDT6P53370 316 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 RPS14P62263 151 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms