RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 OR4K3Q96R72 315 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 SGPP1Q9BX95 441 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 RAB33BQ9H082 229 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 CCDC177Q9NQR7 707 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-202ENST00000357943 COPG2Q9UBF2 871 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 EPHA6Q9UF33 1036 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 KLHL3Q9UH77 587 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 SLC22A14Q9Y267 594 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 DCDC2BA2VCK2 349 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 C2orf74A8MZ97 194 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 KIF1CO43896 1103 aaKnown RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 KCNK5O95279 499 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 MYL2P10916 166 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 UGT2B7P16662 529 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 TAC1P20366 129 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 HPDP32754 393 aaPredicted RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 ALDH18A1P54886 795 aaKnown RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 CLDN6P56747 220 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 INSM1Q01101 510 aaPredicted RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 SPIDRQ14159 915 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 KIR2DS3Q14952 304 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 SETDB1Q15047 1291 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 SF1Q15637 639 aaKnown RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 THEMIS2Q5TEJ8 643 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 CAPN13Q6MZZ7 669 aaPredicted RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 TMEM71Q6P5X7 295 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 WDR74Q6RFH5 385 aaPredicted RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 DHRS13Q6UX07 377 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 ZYG11AQ6WRX3 759 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 FAM92BQ6ZTR7 304 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 TRIM73Q86UV7 250 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 SLC22A18Q96BI1 424 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 MOCOSQ96EN8 888 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 GFM1Q96RP9 751 aaKnown RBP14.35□□□□□ -0.11
CCNE1-202ENST00000357943 RTKNQ9BST9 563 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 CD244Q9BZW8 370 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 TAC3Q9UHF0 121 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 POMT2Q9UKY4 750 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 ENTPD2Q9Y5L3 495 aa14.35□□□□□ -0.11
CCNE1-202ENST00000357943 D6RAR5 112 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 MATN2O00339 956 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 TM9SF1O15321 606 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 CCNT2O60583 730 aaKnown RBP14.34□□□□□ -0.11
CCNE1-202ENST00000357943 STK16O75716 305 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 IPO13O94829 963 aaKnown RBP14.34□□□□□ -0.11
CCNE1-202ENST00000357943 DKK1O94907 266 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 WDR47O94967 919 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 C9P02748 559 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 CPA3P15088 417 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 KCNA4P22459 653 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 ATP5F1P24539 256 aaPredicted RBP14.34□□□□□ -0.11
CCNE1-202ENST00000357943 OAS2P29728 719 aaKnown RBP14.34□□□□□ -0.11
CCNE1-202ENST00000357943 LSSP48449 732 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 NFKB2Q00653 900 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 PCLAFQ15004 111 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 PRAMEF13Q5VWM6 474 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 SPESP1Q6UW49 350 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 THOC6Q86W42 341 aaKnown RBP14.34□□□□□ -0.11
CCNE1-202ENST00000357943 PLXDC1Q8IUK5 500 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 ANKRD42Q8N9B4 389 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 ZDHHC12Q96GR4 267 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 MAP3K3Q99759 626 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 MIPEPQ99797 713 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 MECRQ9BV79 373 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 CNOT10Q9H9A5 744 aaKnown RBP14.34□□□□□ -0.11
CCNE1-202ENST00000357943 MLXIPLQ9NP71 852 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 ACSS2Q9NR19 701 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 UNC13CQ8NB66 2214 aa14.34□□□□□ -0.11
CCNE1-202ENST00000357943 MN1Q10571 1320 aaPredicted RBP14.34□□□□□ -0.11
CCNE1-202ENST00000357943 STX16-NPEPL1H3BU86 382 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 STX16O14662 325 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 ZWINTO95229 277 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 NPPBP16860 134 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 SDHBP21912 280 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 CCND1P24385 295 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 EEF1DP29692 281 aaKnown RBP14.33□□□□□ -0.11
CCNE1-202ENST00000357943 PDX1P52945 283 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 E2F1Q01094 437 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 PCBP2Q15366 365 aaKnown RBP eCLIP14.33□□□□□ -0.11
CCNE1-202ENST00000357943 SNAP47Q5SQN1 464 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 RPS27LQ71UM5 84 aaKnown RBP14.33□□□□□ -0.11
CCNE1-202ENST00000357943 C10orf107Q8IVU9 208 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 KLHDC8AQ8IYD2 350 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 OR2L3Q8NG85 312 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 OR4D9Q8NGE8 314 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 RDH11Q8TC12 318 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 UBTD2Q8WUN7 234 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 TMEM237Q96Q45 408 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 SELENOSQ9BQE4 189 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 SEMA6CQ9H3T2 930 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 DLL3Q9NYJ7 618 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 TMCO1Q9UM00 188 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 SH2B3Q9UQQ2 575 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 KLHL20Q9Y2M5 609 aa14.33□□□□□ -0.11
CCNE1-202ENST00000357943 CNOT1A5YKK6 2376 aaKnown RBP14.33□□□□□ -0.12
CCNE1-202ENST00000357943 IGHV5-10-1A0A0J9YXX1 117 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 E2F3O00716 465 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 PVRP15151 417 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms