RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RPS17P08708 135 aaKnown RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 FGF3P11487 239 aaPredicted RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 TSPAN8P19075 237 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 EPORP19235 508 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 OAS2P29728 719 aaKnown RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 PPM1FP49593 454 aaPredicted RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 HERVK_113P63132 956 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 PCBP2Q15366 365 aaKnown RBP eCLIP24.51■■□□□ 1.515e-26■■■■■ 98.7
SSBP3-202ENST00000357475 TMPRSS9Q7Z410 1059 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 TRIM73Q86UV7 250 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 OOSP2Q86WS3 158 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 OR2A1Q8NGT9 310 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 OR2A14Q96R47 310 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 ERVK-6Q9BXR3 956 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 CNOT10Q9H9A5 744 aaKnown RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 FAM53CQ9NYF3 392 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 TMEM9Q9P0T7 183 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 MID2Q9UJV3 735 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 PCTPQ9UKL6 214 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 ATXN7L1Q9ULK2 861 aaPredicted RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 ISM1B1AKI9 464 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 RPLP0P05388 317 aaKnown RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 IMPDH1P20839 514 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 LSSP48449 732 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 NAGLUP54802 743 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 CDH13P55290 713 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 GFERP55789 205 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 LIPMQ5VYY2 423 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 CAPN13Q6MZZ7 669 aaPredicted RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 CCNYL1Q8N7R7 359 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 NCSTNQ92542 709 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 L3HYPDHQ96EM0 354 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 GATA5Q9BWX5 397 aaPredicted RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 ABCG4Q9H172 646 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 EVA1BQ9NVM1 165 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 PTPRZ1P23471 2315 aaPredicted RBP24.5■■□□□ 1.51
SSBP3-202ENST00000357475 PPP6CO00743 305 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 HOXB3P14651 431 aaPredicted RBP24.5■■□□□ 1.51
SSBP3-202ENST00000357475 UGT2B7P16662 529 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 NPPBP16860 134 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 DNAJB13P59910 316 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 CCDC157Q569K6 752 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 THEMIS2Q5TEJ8 643 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 PRAMEF13Q5VWM6 474 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 ATG14Q6ZNE5 492 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 NUDCD3Q8IVD9 361 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 SLC22A9Q8IVM8 553 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 TEX9Q8N6V9 391 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 AHCYL2Q96HN2 611 aaKnown RBP24.5■■□□□ 1.51
SSBP3-202ENST00000357475 MIPEPQ99797 713 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 NUDT22Q9BRQ3 303 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 SLC32A1Q9H598 525 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 ZBTB26Q9HCK0 441 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 TOR4AQ9NXH8 423 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 KLHL20Q9Y2M5 609 aa24.5■■□□□ 1.51
SSBP3-202ENST00000357475 ZNF839A8K0R7 811 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 K7EPI3 171 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 TM4SF5O14894 197 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 TNFSF14O43557 240 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 TRIM13O60858 407 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 BGNP21810 368 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 MPSTP25325 297 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 IRGCQ6NXR0 463 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 LRRC70Q7Z2Q7 622 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 GOLGA7Q7Z5G4 137 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 RAB44Q7Z6P3 723 aaPredicted RBP24.49■■□□□ 1.51
SSBP3-202ENST00000357475 ZNF483Q8TF39 744 aaPredicted RBP24.49■■□□□ 1.51
SSBP3-202ENST00000357475 CCDC126Q96EE4 140 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 CDC6Q99741 560 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 C1QTNF3Q9BXJ4 246 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 LRRN3Q9H3W5 708 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 GSTO2Q9H4Y5 243 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 SYNDIG1Q9H7V2 258 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 OPTCQ9UBM4 332 aa24.49■■□□□ 1.51
SSBP3-202ENST00000357475 HEATR5BQ9P2D3 2071 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 A0A1B0GTL3 188 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 BIRC5O15392 142 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 CAPN5O15484 640 aaPredicted RBP24.48■■□□□ 1.51
SSBP3-202ENST00000357475 DUX1O43812 170 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 KIF1CO43896 1103 aaKnown RBP24.48■■□□□ 1.51
SSBP3-202ENST00000357475 NRP2O60462 931 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 PRAMEF4O60810 478 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 SUPT7LO94864 414 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 PRDX3P30048 256 aaKnown RBP24.48■■□□□ 1.51
SSBP3-202ENST00000357475 ARRB2P32121 409 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 GPLD1P80108 840 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 GTF2H2Q13888 395 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 KIR2DS3Q14952 304 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 CHI3L2Q15782 390 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 PRAMEF9Q5VWM5 478 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 GTF2H2CQ6P1K8 395 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 FAM92BQ6ZTR7 304 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 SNX31Q8N9S9 440 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 NETO1Q8TDF5 533 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 TGM7Q96PF1 710 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 KLHL25Q9H0H3 589 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 DNAJC11Q9NVH1 559 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 CUEDC1Q9NWM3 386 aaPredicted RBP24.48■■□□□ 1.51
SSBP3-202ENST00000357475 POMT2Q9UKY4 750 aa24.48■■□□□ 1.51
SSBP3-202ENST00000357475 TNPO3Q9Y5L0 923 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms