RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 KLHL42Q9P2K6 505 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 EIF3KQ9UBQ5 218 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ENPP5Q9UJA9 477 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MRPS7Q9Y2R9 242 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MATN3O15232 486 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 GKP32189 559 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 BUD31P41223 144 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MANFP55145 182 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 RAVER1Q8IY67 606 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 OR10T2Q8NGX3 314 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 P2RY11Q96G91 374 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 CNOT2Q9NZN8 540 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 HCN2Q9UL51 889 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SPATA31A5Q5VU36 1347 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SPATA31A7Q8IWB4 1347 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ARFGEF2Q9Y6D5 1785 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 FAAHO00519 579 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SNAPINO95295 136 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 AK1P00568 194 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SPAM1P38567 509 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 GRM5P41594 1212 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MKRN4PQ13434 485 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 DEFB106AQ8N104 65 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 PYURFQ96I23 114 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 FBXL18Q96ME1 805 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 AGO1Q9UL18 857 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 F5H423 210 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 POMCP01189 267 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MPSTP25325 297 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ECHS1P30084 290 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 PSEN2P49810 448 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 USF2Q15853 346 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 KCNA10Q16322 511 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 TBRG1Q3YBR2 411 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ULK3Q6PHR2 472 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 NLRP8Q86W28 1048 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ARRDC4Q8NCT1 418 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 WDR18Q9BV38 432 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SULT1C2O00338 296 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 CRTAPO75718 401 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SLC25A12O75746 678 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LINGO3P0C6S8 592 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 NPTX1Q15818 432 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 GXYLT1Q4G148 440 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 OGFOD2Q6N063 350 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ZDHHC14Q8IZN3 488 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 OR10G2Q8NGC3 310 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 TMEM80Q96HE8 168 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 PCDHB18PQ96TA0 734 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 OGDHLQ9ULD0 1010 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 TYRP14679 529 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 M6PRP20645 277 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 GSK3BP49841 420 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MGAT5BQ3V5L5 792 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 C6orf141Q5SZD1 244 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 PPTC7Q8NI37 304 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 CANT1Q8WVQ1 401 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 KIAA1143Q96AT1 154 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 DGKBQ9Y6T7 804 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LRRC14BA6NHZ5 514 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 EPHB6O15197 1021 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 NOBOXO60393 691 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 CLUP10909 449 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 RGS8P57771 180 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TMPRSS11BQ86T26 416 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF227Q86WZ6 799 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 PELOQ9BRX2 385 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 MAFFQ9ULX9 164 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 LOC100130705A0A1B0GUX0 176 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 WASH4PA8MWX3 477 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 C1QTNF3-AMACRE9PGA6 284 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 OR7A10O76100 309 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 PRH1P02810 166 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 BNIP3Q12983 259 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 UGT3A2Q3SY77 523 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 LPCAT3Q6P1A2 487 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 MIB1Q86YT6 1006 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 OR8K5Q8NH50 307 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ACDQ96AP0 544 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 APOLD1Q96LR9 279 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 NLGN3Q9NZ94 848 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 GADD45AP24522 165 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 E2F1Q01094 437 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ORC1Q13415 861 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 USP41Q3LFD5 358 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 MAELQ96JY0 434 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SNX27Q96L92 541 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 BIN3Q9NQY0 253 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TAS2R10Q9NYW0 307 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 CNOT6Q9ULM6 557 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 FAM50BQ9Y247 325 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 IFNA1P01562 189 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 CXCR3P49682 368 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 WDR45BQ5MNZ6 344 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 MSANTD2Q6P1R3 559 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 IL31RAQ8NI17 732 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SPPL2BQ8TCT7 592 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TFAP2CQ92754 450 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 MKRN2Q9H000 416 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SPATC1LQ9H0A9 340 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms