RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 A0A1W2PPW3 197 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 HNRNPCL3B7ZW38 293 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ITGA10O75578 1167 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 HNRNPCL4P0DMR1 293 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 PSMD8P48556 350 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 CEBPGP53567 150 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 TSTQ16762 297 aaKnown RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 FAM124AQ86V42 546 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ARMC10Q8N2F6 343 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 PRICKLE1Q96MT3 831 aaPredicted RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 DPAGT1Q9H3H5 408 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ZCCHC3Q9NUD5 404 aaKnown RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 OR2AT4A6NND4 320 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 CCRL2O00421 344 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 PCCBP05166 539 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ZNF823P16415 610 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 CPN2P22792 545 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 SLC25A11Q02978 314 aaKnown RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 DUOXA1Q1HG43 343 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 FUT10Q6P4F1 479 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ZNF548Q8NEK5 533 aaPredicted RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 ACOT12Q8WYK0 555 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 FUBP3Q96I24 572 aaKnown RBP eCLIP14.51□□□□□ -0.09
CHD4-201ENST00000357008 CTPS2Q9NRF8 586 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 GALPQ9UBC7 116 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 MAU2Q9Y6X3 613 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 KANTRA0A1W2PQU2 76 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 CPNE3O75131 537 aaKnown RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 KDM4BO94953 1096 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ITGB1P05556 798 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 H1F0P07305 194 aaKnown RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 DLDP09622 509 aaKnown RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 PCLAFQ15004 111 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 LRRC70Q7Z2Q7 622 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 GLIS1Q8NBF1 620 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 LCN9Q8WX39 176 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 LMLNQ96KR4 655 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ERVW-1Q9UQF0 538 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 TMED5Q9Y3A6 229 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 HTRA2O43464 458 aaPredicted RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 NFATC1O95644 943 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ABHD18Q0P651 414 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 CLEC20AQ6ZU45 233 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 PTF1AQ7RTS3 328 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 KXD1Q9BQD3 176 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 IRF2BPLQ9H1B7 796 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 LIN28AQ9H9Z2 209 aaKnown RBP14.51□□□□□ -0.09
CHD4-201ENST00000357008 HAS3O00219 553 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 APODP05090 189 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 ADAM15Q13444 863 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 C4orf46Q504U0 113 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 SPIN4Q56A73 249 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 VARS2Q5ST30 1063 aaKnown RBP14.5□□□□□ -0.09
CHD4-201ENST00000357008 OR4F3Q6IEY1 312 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 CENPSQ8N2Z9 138 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 OR2L3Q8NG85 312 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 FBXL18Q96ME1 805 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 SLC30A2Q9BRI3 323 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 CDH7Q9ULB5 785 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 GLDCP23378 1020 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 PDHA2P29803 388 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 SMSP52788 366 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 TLR1Q15399 786 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 FRG2Q64ET8 278 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 C2orf15Q8WU43 125 aaKnown RBP14.5□□□□□ -0.09
CHD4-201ENST00000357008 FRG2BQ96QU4 278 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 P2RX2Q9UBL9 471 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 ABCG2Q9UNQ0 655 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 RNF6Q9Y252 685 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 CREG1O75629 220 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 HLA-DPB1P04440 258 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 TACSTD2P09758 323 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 C1QTNF8P60827 252 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 UFM1P61960 85 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 SDR16C5Q8N3Y7 309 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 C7orf43Q8WVR3 580 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 TBX5Q99593 518 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 MKKSQ9NPJ1 570 aaPredicted RBP14.5□□□□□ -0.09
CHD4-201ENST00000357008 NCBP2P52298 156 aaKnown RBP eCLIP14.5□□□□□ -0.094e-7■■□□□ 13.1
CHD4-201ENST00000357008 FAM110CQ1W6H9 321 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 INO80EQ8NBZ0 244 aaPredicted RBP14.5□□□□□ -0.09
CHD4-201ENST00000357008 OR6K6Q8NGW6 343 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 NCSTNQ92542 709 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 ZNF514Q96K75 400 aaPredicted RBP14.5□□□□□ -0.09
CHD4-201ENST00000357008 TNFRSF10DQ9UBN6 386 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 EPHX1P07099 455 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 MPIP34949 423 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 AVPR1BP47901 424 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 DEFA5Q01523 94 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 CBFBQ13951 182 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 MEP1AQ16819 746 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 FAM129CQ86XR2 697 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 CPA6Q8N4T0 437 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 TMEM203Q969S6 136 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 FBXL20Q96IG2 436 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 RDH12Q96NR8 316 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 PIGVQ9NUD9 493 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 MOCS1Q9NZB8 636 aa14.5□□□□□ -0.09
CHD4-201ENST00000357008 WRAP73Q9P2S5 460 aaPredicted RBP14.5□□□□□ -0.09
CHD4-201ENST00000357008 ISPDA4D126 451 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms