RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DNAJC15Q9Y5T4 150 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 MED7O43513 233 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 DARSP14868 501 aaKnown RBP15.35■□□□□ 0.05
RTN3-205ENST00000356000 CD19P15391 556 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 KCNQ1P51787 676 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 SSTP61278 116 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 IQCCQ4KMZ1 466 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 KRT73Q86Y46 540 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 CHPFQ8IZ52 775 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 CAMKK1Q8N5S9 505 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 RDM1Q8NG50 284 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 OR4D10Q8NGI6 311 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 BTN2A2Q8WVV5 523 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 DNASE1L2Q92874 299 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 COA1Q9GZY4 146 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 ZCCHC4Q9H5U6 513 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 SIRT5Q9NXA8 310 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 DTX4Q9Y2E6 619 aa15.35■□□□□ 0.05
RTN3-205ENST00000356000 SLC22A23A1A5C7 686 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PIPSLA2A3N6 862 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PCDH17O14917 1159 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 CFBP00751 764 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 ARSBP15848 533 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PRKAR1BP31321 381 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 MICAQ29983 383 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PAN2Q504Q3 1202 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 XKR9Q5GH70 373 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 GNASQ5JWF2 1037 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 RRM2BQ7LG56 351 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 MRPL10Q7Z7H8 261 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 MFSD6LQ8IWD5 586 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 FAM9CQ8IZT9 166 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 UBE2J2Q8N2K1 259 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 CLHC1Q8NHS4 586 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 CCDC115Q96NT0 180 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 RBP7Q96R05 134 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 DPCDQ9BVM2 203 aaPredicted RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 MRPL4Q9BYD3 311 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 MCOLN1Q9GZU1 580 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 KCNH7Q9NS40 1196 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 CATSPERZQ9NTU4 200 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 ZNF112Q9UJU3 913 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PCDHGA9Q9Y5G4 932 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 ANKRD12Q6UB98 2062 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 A0A087X1B8 175 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 TUBAL3A6NHL2 446 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 E9PAM4 449 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 RHOBTB1O94844 696 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 ZNF37AP17032 561 aaPredicted RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 MAP2K3P46734 347 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 MRPL19P49406 292 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 CLDN20P56880 219 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 SPP2Q13103 211 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 FGFBP1Q14512 234 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 MXD4Q14582 209 aaPredicted RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 VEPH1Q14D04 833 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 KYAT1Q16773 422 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 APOBEC3FQ8IUX4 373 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 APH1BQ8WW43 257 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 FUBP1Q96AE4 644 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 RADILQ96JH8 1075 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 TEX37Q96LM6 180 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 GMLQ99445 158 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 LGMNQ99538 433 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 RAD9AQ99638 391 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 GSX2Q9BZM3 304 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 GABARAPL1Q9H0R8 117 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PIGUQ9H490 435 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 OLA1Q9NTK5 396 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 LYARQ9NX58 379 aaKnown RBP15.34■□□□□ 0.05
RTN3-205ENST00000356000 MIOSQ9NXC5 875 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 KCMF1Q9P0J7 381 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PRKAG2Q9UGJ0 569 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 PTGDR2Q9Y5Y4 395 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 STYXL1Q9Y6J8 313 aa15.34■□□□□ 0.05
RTN3-205ENST00000356000 KRBOX1C9JBD0 128 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 PEX14O75381 377 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 HGFP14210 728 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 PLK1P53350 603 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 Q3ZCU0 254 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 C19orf48Q6RUI8 117 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 KLHL17Q6TDP4 642 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 LRRC8DQ7L1W4 858 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 C4orf19Q8IY42 314 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 BARHL1Q9BZE3 327 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 BCL2L14Q9BZR8 327 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 ZFP64Q9NPA5 681 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 RASSF1Q9NS23 344 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 SETD4Q9NVD3 440 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 LIMD1Q9UGP4 676 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 PSORS1C1Q9UIG5 152 aa15.33■□□□□ 0.05
RTN3-205ENST00000356000 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 SOWAHBA6NEL2 793 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 PIP5K1BO14986 540 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 KPNA5O15131 536 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 MUSKO15146 869 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 ST8SIA5O15466 376 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 DHX15O43143 795 aaKnown RBP15.33■□□□□ 0.04
RTN3-205ENST00000356000 AOC2O75106 756 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 SLC43A1O75387 559 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms