RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SYN3O14994 580 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 PLGP00747 810 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 PRKCHP24723 683 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 CCR8P51685 355 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 JAM2P57087 298 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 HERVK_113P63132 956 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SYCE2Q6PIF2 218 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ERI1Q8IV48 349 aaKnown RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 LGI4Q8N135 537 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 PSMG2Q969U7 264 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 RELTQ969Z4 430 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 HNRNPABQ99729 332 aaKnown RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ERVK-6Q9BXR3 956 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 NUDT15Q9NV35 164 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 CARD8Q9Y2G2 431 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 AGR2O95994 175 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SRPRAP08240 638 aaKnown RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 CTSOP43234 321 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SLC25A25Q6KCM7 469 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF227Q86WZ6 799 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 NUDT13Q86X67 352 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SLC7A6OSQ96CW6 309 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 IL12RB2Q99665 862 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SPATA7Q9P0W8 599 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 FZD4Q9ULV1 537 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ARL5AQ9Y689 179 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF670-ZNF695F2Z2N8 137 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 NOL4O94818 638 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 GADD45AP24522 165 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 CLCNKBP51801 687 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 CD83Q01151 205 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 FAM189A2Q15884 450 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SGCBQ16585 318 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ALG10Q5BKT4 473 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 DNM1P34Q6PK57 102 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 FOXRED2Q8IWF2 684 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF101Q8IZC7 436 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 LNX2Q8N448 690 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SLC44A3Q8N4M1 653 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ABCD2Q9UBJ2 740 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SNX10Q9Y5X0 201 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 C8BP07358 591 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SLC10A7Q0GE19 358 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 PDCD4Q53EL6 469 aaKnown RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 KIAA0930Q6ICG6 404 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 HID1Q8IV36 788 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 KCT2Q8NC54 265 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 GEMIN6Q8WXD5 167 aaKnown RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 MTERF1Q99551 399 aaKnown RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 MIPEPQ99797 713 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 TBL1XR1Q9BZK7 514 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 FBXW11Q9UKB1 542 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 GAD2Q05329 585 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 MAD2L1BPQ15013 274 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-201ENST00000355497 FBXO43Q4G163 708 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 TUBA3EQ6PEY2 450 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 FBXO22Q8NEZ5 403 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 STON2Q8WXE9 905 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ESAMQ96AP7 390 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 TMED9Q9BVK6 235 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 OR2AG1Q9H205 316 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 ANKHQ9HCJ1 492 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 CENPMQ9NSP4 180 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 IGSF9Q9P2J2 1179 aa14.56□□□□□ -0.08
LMX1B-201ENST00000355497 SCAMP1O15126 338 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 CSTBP04080 98 aaKnown RBP14.55□□□□□ -0.08
LMX1B-201ENST00000355497 STOMP27105 288 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 PTGIRP43119 386 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 DGKGP49619 791 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 DUSP28Q4G0W2 176 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 HGSNATQ68CP4 663 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 ADGRD2Q7Z7M1 963 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 NATD1Q8N6N6 113 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF565Q8N9K5 539 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 YTHDF1Q9BYJ9 559 aaKnown RBP14.55□□□□□ -0.08
LMX1B-201ENST00000355497 B3GAT2Q9NPZ5 323 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 PLEKHA6Q9Y2H5 1048 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 KCNIP3Q9Y2W7 256 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 H0YJX3 145 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 CST3P01034 146 aaPredicted RBP14.55□□□□□ -0.08
LMX1B-201ENST00000355497 FESP07332 822 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 PRPS1L1P21108 318 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 FUT4P22083 530 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 IRF9Q00978 393 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 DNASE1L3Q13609 305 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 HNRNPDQ14103 355 aaKnown RBP14.55□□□□□ -0.08
LMX1B-201ENST00000355497 TPRG1LQ5T0D9 272 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 CNTN3Q9P232 1028 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 VWDEQ8N2E2 1590 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 DNM1LO00429 736 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 DSC3Q14574 896 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 KLHDC10Q6PID8 442 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 PACRGLQ8N7B6 248 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 PCED1BQ96HM7 432 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 DCSTAMPQ9H295 470 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 ADAP2Q9NPF8 381 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 TRIM36Q9NQ86 728 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 WASF3Q9UPY6 502 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 VNN2O95498 520 aa14.55□□□□□ -0.08
LMX1B-201ENST00000355497 IMPDH1P20839 514 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms