RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ANKFN1Q8N957 763 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 COQ8AQ8NI60 647 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SPACA7Q96KW9 195 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ASPNQ9BXN1 380 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 RAB36O95755 333 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 GNALP38405 381 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 SREBF2Q12772 1141 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ABHD15Q6UXT9 468 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 FAM46DQ8NEK8 389 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 TTYH2Q9BSA4 534 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 TMED9Q9BVK6 235 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF510Q9Y2H8 683 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 LRRIQ1Q96JM4 1722 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 TMEM233B4DJY2 109 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 TPST2O60704 377 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 CLIC3O95833 236 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 LHCGRP22888 699 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ADORA2AP29274 412 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 IL10RBQ08334 325 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 SERPINA9Q86WD7 417 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 UBQLNLQ8IYU4 475 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 LGALS12Q96DT0 336 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 NDC1Q9BTX1 674 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 APOBEC3GQ9HC16 384 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 KIAA1522Q9P206 1035 aaPredicted RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 DISC1C4P0D8 188 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 MSI1O43347 362 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 IFNA21P01568 189 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ITPKBP27987 946 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 HTR2AP28223 471 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 NFATC3Q12968 1075 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 SNAP47Q5SQN1 464 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 LRRN1Q6UXK5 716 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 CADM2Q8N3J6 435 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 HDDC3Q8N4P3 179 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 CLIP3Q96DZ5 547 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 TSNAXQ99598 290 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC17A6Q9P2U8 582 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 FBXW11Q9UKB1 542 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 A0A1W2PQH9 124 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 LRRN3E7EW58 273 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 CRYZL1O95825 349 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ADCYAP1R1P41586 468 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 TAS2R43P59537 309 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 DNAJB13P59910 316 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 RPS3AP61247 264 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 HNRNPA0Q13151 305 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 DUOXA1Q1HG43 343 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ATXN7L2Q5T6C5 722 aaPredicted RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZC3HC1Q86WB0 502 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ACTR6Q9GZN1 396 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 LRRN3Q9H3W5 708 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 EXOSC1Q9Y3B2 195 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 MAGED1Q9Y5V3 778 aaPredicted RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 PIK3C2BO00750 1634 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 CCL22O00626 93 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 INSIG1O15503 277 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 XYLBO75191 536 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 GDI2P50395 445 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 SULT2A1Q06520 285 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 CPNE8Q86YQ8 564 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 SCRN2Q96FV2 425 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 AHCYL2Q96HN2 611 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 MAELQ96JY0 434 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 P2RX7Q99572 595 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 PLEKHA1Q9HB21 404 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 FAM198AQ9UFP1 575 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 IFT52Q9Y366 437 aa12.43□□□□□ -0.42
SYNCRIP-201ENST00000355238 ALPPP05187 535 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 GSTM2P28161 218 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 NFKB2Q00653 900 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 FADDQ13158 208 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ARRDC4Q8NCT1 418 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 PFDN5Q99471 154 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 HNRNPABQ99729 332 aaKnown RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 BRINP2Q9C0B6 783 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 BTBD1Q9H0C5 482 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 EXO5Q9H790 373 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 LYARQ9NX58 379 aaKnown RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 GPSM3Q9Y4H4 160 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 SNAP29O95721 258 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 DNASE1P24855 282 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 FAAH2Q6GMR7 532 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ARL9Q6T311 187 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF627Q7L945 461 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC15A3Q8IY34 581 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 TMEM199Q8N511 208 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 NAT16Q8N8M0 369 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 MAGEH1Q9H213 219 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 FOLH1BQ9HBA9 442 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 TAS2R10Q9NYW0 307 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 COL1A2P08123 1366 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 A0A1B0GVC2 190 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 FFAR2O15552 330 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms