RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RIBC2Q9H4K1 309 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 BRD7Q9NPI1 651 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 SLC35C2Q9NQQ7 365 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 TLR8Q9NR97 1041 aaKnown RBP9.15□□□□□ -0.94
SMG6-202ENST00000354901 COMMD8Q9NX08 183 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 ZFP37Q9Y6Q3 630 aaPredicted RBP9.15□□□□□ -0.94
SMG6-202ENST00000354901 PRAMEF11O60813 436 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 WISP3O95389 354 aaPredicted RBP9.15□□□□□ -0.94
SMG6-202ENST00000354901 FCER2P06734 321 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 RPL17P18621 184 aaKnown RBP9.15□□□□□ -0.94
SMG6-202ENST00000354901 DDCP20711 480 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 SLC6A4P31645 630 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 HTR3AP46098 478 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 TWF1Q12792 350 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 KCNAB2Q13303 367 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 ZNF404Q494X3 552 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 SPANXN2Q5MJ10 180 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 KANK2Q63ZY3 851 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 C16orf62Q7Z3J2 963 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 NOXA1Q86UR1 476 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 PHYKPLQ8IUZ5 450 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 PARP16Q8N5Y8 322 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 CHDHQ8NE62 594 aaPredicted RBP9.15□□□□□ -0.94
SMG6-202ENST00000354901 IL17RDQ8NFM7 739 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 OR6K2Q8NGY2 324 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 LINGO1Q96FE5 620 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 RERGLQ9H628 205 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 GKN1Q9NS71 199 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 ATP6V1HQ9UI12 483 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 MED16Q9Y2X0 877 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 SCN10AQ9Y5Y9 1956 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 SLC1A7O00341 560 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 PLK4O00444 970 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 ANGPTL1O95841 491 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 CYP2A7P20853 494 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 MC4RP32245 332 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 PSMD8P48556 350 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 MTPNP58546 118 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 SETMARQ53H47 684 aaPredicted RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 SGO1Q5FBB7 561 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 RSPO2Q6UXX9 243 aaPredicted RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 RBM23Q86U06 439 aaKnown RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 RAB43Q86YS6 212 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 ZDHHC13Q8IUH4 622 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 OR8H3Q8N146 312 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 FBXL6Q8N531 539 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 TEX26Q8N6G2 289 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 ZNF540Q8NDQ6 660 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 ST13P5Q8NFI4 369 aaPredicted RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 OR2T11Q8NH01 316 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 RIT1Q92963 219 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 TOP1MTQ969P6 601 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 MUL1Q969V5 352 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 FUBP1Q96AE4 644 aaKnown RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 Q96MT0 163 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 TRNT1Q96Q11 434 aaKnown RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 MYOCQ99972 504 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 SYTL2Q9HCH5 934 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 SDR39U1Q9NRG7 319 aaPredicted RBP9.15□□□□□ -0.95
SMG6-202ENST00000354901 ZMYM5Q9UJ78 669 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 ZNF225Q9UK10 706 aa9.15□□□□□ -0.95
SMG6-202ENST00000354901 BTN3A3O00478 584 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 GJB5O95377 273 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 C1RP00736 705 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 MT-ND2P03891 347 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 CNPP09543 421 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 BMP1P13497 986 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 ZNF250P15622 560 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 CTRB1P17538 263 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 MTHFRP42898 656 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 CCT3P49368 545 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 HTR6P50406 440 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 DGKQP52824 942 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 DAG1Q14118 895 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 PARP15Q460N3 678 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 CTRB2Q6GPI1 263 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 BLOC1S3Q6QNY0 202 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 PRSS55Q6UWB4 352 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 AHSA2Q719I0 299 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 EID3Q8N140 333 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 GALNT11Q8NCW6 608 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 LILRB1Q8NHL6 650 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 DEDD2Q8WXF8 326 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 KIAA1191Q96A73 305 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 MYRFLQ96LU7 910 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 UROC1Q96N76 676 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 HOPXQ9BPY8 73 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 TFB2MQ9H5Q4 396 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 EVA1BQ9NVM1 165 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 SMPD4Q9NXE4 827 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 TRMT6Q9UJA5 497 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 PTPRDP23468 1912 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 TYW5A2RUC4 315 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 KERAO60938 352 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 CTPS1P17812 591 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 SGSHP51688 502 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms