RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RNF44Q7L0R7 432 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 NLRP9Q7RTR0 991 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 MAMDC2Q7Z304 686 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 SPNS2Q8IVW8 549 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 PPHLN1Q8NEY8 458 aaKnown RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 OR2A1Q8NGT9 310 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 HMGCLL1Q8TB92 370 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 PPP4R1Q8TF05 950 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 UBE2Q2Q8WVN8 375 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 WDR77Q9BQA1 342 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 FRMD8P1Q9BZ68 369 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 CDC23Q9UJX2 597 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 ZNF148Q9UQR1 794 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 COPG1Q9Y678 874 aaKnown RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 LOC105369274A0A096LPK9 316 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 LOC102723532A0A0G2JNH3 316 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 E7EVH7 732 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 GAS8O95995 478 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 RPN2P04844 631 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 RPS3P23396 243 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 VSX2P58304 361 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 FASTKQ14296 549 aaKnown RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 GRM7Q14831 915 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 SF1Q15637 639 aaKnown RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 PCID2Q5JVF3 399 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 SEL1L2Q5TEA6 688 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 YOD1Q5VVQ6 348 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 OR4N4Q8N0Y3 316 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 ZADH2Q8N4Q0 377 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 OR2L3Q8NG85 312 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 OR11G2Q8NGC1 345 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 NACC2Q96BF6 587 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 SLC22A18Q96BI1 424 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 C10orf90Q96M02 699 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 BIRC8Q96P09 236 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 TTC1Q99614 292 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 MIPEPQ99797 713 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 SELENOSQ9BQE4 189 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 TSSK1BQ9BXA7 367 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 EIF2B3Q9NR50 452 aaKnown RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 PAK5Q9P286 719 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 STOX2Q9P2F5 926 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-201ENST00000354513 SLC5A6Q9Y289 635 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 PPP2R2CQ9Y2T4 447 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 MAU2Q9Y6X3 613 aa15.17■□□□□ 0.02
PDGFA-201ENST00000354513 TARM1B6A8C7 271 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 F8W8V4 182 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 ERGP11308 486 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 GLRBP48167 497 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 TTPAP49638 278 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 SESN2P58004 480 aaPredicted RBP15.16■□□□□ 0.02
PDGFA-201ENST00000354513 TMED2Q15363 201 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 TUBB8Q3ZCM7 444 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 ZC3H12BQ5HYM0 836 aaKnown RBP15.16■□□□□ 0.02
PDGFA-201ENST00000354513 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.16■□□□□ 0.02
PDGFA-201ENST00000354513 AARS2Q5JTZ9 985 aaKnown RBP15.16■□□□□ 0.02
PDGFA-201ENST00000354513 TCTE1Q5JU00 501 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 WASHC2DQ5SRD0 308 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 KCNMB4Q86W47 210 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 PARP9Q8IXQ6 854 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 AMER2Q8N7J2 671 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 RAD51AP1Q96B01 352 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 RAB11FIP5Q9BXF6 653 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 INTS7Q9NVH2 962 aaKnown RBP15.16■□□□□ 0.02
PDGFA-201ENST00000354513 SYBUQ9NX95 663 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 GALPQ9UBC7 116 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 GNPTGQ9UJJ9 305 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 SLC39A10Q9ULF5 831 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 PYCARDQ9ULZ3 195 aa15.16■□□□□ 0.02
PDGFA-201ENST00000354513 A0A0J9YVX5 310 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 OR2A25A4D2G3 310 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 KLHL41O60662 606 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 NIPSNAP2O75323 286 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 KLHL18O94889 574 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 FKBP9O95302 570 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TSFMP43897 325 aaKnown RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 EFNA3P52797 238 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 KLC1Q07866 573 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TYSND1Q2T9J0 566 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 PTRHD1Q6GMV3 140 aaKnown RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 CNSTQ6PJW8 725 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 CES3Q6UWW8 571 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 RNF10Q8N5U6 811 aaKnown RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TTC29Q8NA56 475 aaPredicted RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 ST6GALNAC3Q8NDV1 305 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TM9SF4Q92544 642 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 LPGAT1Q92604 370 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 ZUFSPQ96AP4 578 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 MFSD3Q96ES6 412 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 PANX3Q96QZ0 392 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TSGA10Q9BZW7 698 aa15.15■□□□□ 0.02
PDGFA-201ENST00000354513 MRM3Q9HC36 420 aaKnown RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TSR3Q9UJK0 312 aaKnown RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 TTC7AQ9ULT0 858 aaPredicted RBP15.15■□□□□ 0.02
PDGFA-201ENST00000354513 POLEQ07864 2286 aa15.14■□□□□ 0.01
PDGFA-201ENST00000354513 IGLV3-12A0A075B6K2 115 aa15.14■□□□□ 0.01
PDGFA-201ENST00000354513 IGKV1-8A0A0C4DH67 115 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms