RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
LMBR1-201ENST00000353442 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
LMBR1-201ENST00000353442 MAGEB17A8MXT2 336 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 MEN1O00255 615 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 IFNA21P01568 189 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 OR10A6Q8NH74 314 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 PDLIM2Q96JY6 352 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
LMBR1-201ENST00000353442 GNG8Q9UK08 70 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 PPM1HQ9ULR3 514 aa13.17□□□□□ -0.3
LMBR1-201ENST00000353442 J3QLW9 94 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 DUSP11O75319 330 aaKnown RBP13.16□□□□□ -0.3
LMBR1-201ENST00000353442 BCKDHAP12694 445 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 ZNF19P17023 458 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 HNF1BP35680 557 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 VSX2P58304 361 aaPredicted RBP13.16□□□□□ -0.3
LMBR1-201ENST00000353442 SHQ1Q6PI26 577 aaKnown RBP13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TMED4Q7Z7H5 227 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 CAVIN3Q969G5 261 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TCF12Q99081 682 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 OR10A4Q9H209 315 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 USP29Q9HBJ7 922 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 H3BQF6 201 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 NNATQ16517 81 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 DECR1Q16698 335 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TMEM119Q4V9L6 283 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 DNAJB7Q7Z6W7 309 aaPredicted RBP13.16□□□□□ -0.3
LMBR1-201ENST00000353442 PLD4Q96BZ4 506 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TMEM51Q9NW97 253 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TNFSF12O43508 249 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 FKBP1BP68106 108 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 RBM44Q6ZP01 1051 aaKnown RBP13.16□□□□□ -0.3
LMBR1-201ENST00000353442 PCDH19Q8TAB3 1148 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 IL1RAPQ9NPH3 570 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 ABCD2Q9UBJ2 740 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 KCNU1A8MYU2 1149 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 SHOXO15266 292 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 VIPR1P32241 457 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 B3GNT6Q6ZMB0 384 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 COMTD1Q86VU5 262 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 ZBED6CLQ96FA7 236 aaPredicted RBP13.16□□□□□ -0.3
LMBR1-201ENST00000353442 HIF1ANQ9NWT6 349 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 MAGEL2Q9UJ55 1249 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 ACTL6BO94805 426 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 VAMP1P23763 118 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 LRRC66Q68CR7 880 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 ASB18Q6ZVZ8 466 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 LAPTM4BQ86VI4 370 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 ZNF184Q99676 751 aaPredicted RBP13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TMED9Q9BVK6 235 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 ERVK-5Q9HDB9 667 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 UTS2RQ9UKP6 389 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 PCDH7O60245 1069 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 CLCQ05315 142 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 XKRXQ6PP77 449 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 POGLUT1Q8NBL1 392 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 SLC22A18Q96BI1 424 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 CYTH4Q9UIA0 394 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
LMBR1-201ENST00000353442 TRIM64CA6NLI5 447 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 NRP1O14786 923 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 ZNF776Q68DI1 518 aaPredicted RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 PDE12Q6L8Q7 609 aaKnown RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 OR52E4Q8NGH9 312 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 SLC22A17Q8WUG5 538 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 FBRSL1Q9HCM7 1045 aaKnown RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 IFT80Q9P2H3 777 aaPredicted RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 GLOD5A6NK44 160 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 AGPSO00116 658 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 VILLO15195 856 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 MLLT10P55197 1068 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 ZNF844Q08AG5 666 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 CAMKVQ8NCB2 501 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 ACDQ96AP0 544 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 RTKNQ9BST9 563 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 GRHPRQ9UBQ7 328 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 A0A1W2PPM1 405 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 ETS2P15036 469 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 PVALBP20472 110 aaPredicted RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 DUSP3P51452 185 aaPredicted RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 KHDC1LQ5JSQ8 128 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 DQX1Q8TE96 717 aaKnown RBP13.15□□□□□ -0.3
LMBR1-201ENST00000353442 DMRTB1Q96MA1 342 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 KRT36O76013 467 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 RHOQP17081 205 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 FOLH1Q04609 750 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 SLC1A5Q15758 541 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
LMBR1-201ENST00000353442 UFD1Q92890 307 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms