RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 RBMX2Q9Y388 322 aaKnown RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 PCDHGA2Q9Y5H1 932 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 HOXD9P28356 352 aaPredicted RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 NTSR1P30989 418 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 ITGADQ13349 1161 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 TFGQ92734 400 aaPredicted RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 CITED4Q96RK1 184 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 C19orf43Q9BQ61 176 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 RPRD1BQ9NQG5 326 aaKnown RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 GALPQ9UBC7 116 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 GULP1Q9UBP9 304 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 LHX3Q9UBR4 397 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 TTC34A8MYJ7 566 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 SH3BGRLO75368 114 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 HMGA1P17096 107 aaKnown RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 CEBPBP17676 345 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 LRRC73Q5JTD7 316 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 FAM91A1Q658Y4 838 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 C16orf62Q7Z3J2 963 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 ZBTB46Q86UZ6 589 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 OR10G6Q8NH81 332 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 MRTO4Q9UKD2 239 aaKnown RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 WASF2Q9Y6W5 498 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 LOC285556D6RIA3 1793 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 S100A6P06703 90 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ALPPL2P10696 532 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 DRD1P21728 446 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ACTR3P61158 418 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 MAPK11Q15759 364 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 COQ5Q5HYK3 327 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 PSAPL1Q6NUJ1 521 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 NIPAL1Q6NVV3 410 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CASP12Q6UXS9 341 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ZNF765Q7L2R6 523 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CEP97Q8IW35 865 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 BTBD9Q96Q07 612 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 OR52B2Q96RD2 323 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ACAT2Q9BWD1 397 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 MVB12BQ9H7P6 319 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CARS2Q9HA77 564 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 IFT80Q9P2H3 777 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 SLCO3A1Q9UIG8 710 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 PCDHB11Q9Y5F2 797 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 POLR2AP24928 1970 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 KIAA1217Q5T5P2 1943 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 H0Y858 1186 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 OR1F1O43749 312 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 VARSP26640 1264 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 HNRNPA1L2Q32P51 320 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 UNC50Q53HI1 259 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 GALNT18Q6P9A2 607 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CDHR3Q6ZTQ4 885 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ZC3H7AQ8IWR0 971 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 C12orf76Q8N812 135 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 RGMAQ96B86 450 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 MSANTD3Q96H12 275 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 PKMYT1Q99640 499 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 KXD1Q9BQD3 176 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 DCUN1D5Q9BTE7 237 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 MCOLN1Q9GZU1 580 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 RDH14Q9HBH5 336 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 NDOR1Q9UHB4 597 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 RAB26Q9ULW5 256 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 MROH6A6NGR9 719 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 OR5K4A6NMS3 321 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 MAGEB17A8MXT2 336 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 OR10H2O60403 315 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 LRATO95237 230 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 NTRK1P04629 796 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CHN2P52757 468 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 SLBPQ14493 270 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 FAM182AQ5T1J6 154 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CYP4V2Q6ZWL3 525 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ZNF534Q76KX8 674 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 TTC29Q8NA56 475 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 C7orf57Q8NEG2 295 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 SLC5A11Q8WWX8 675 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ASB9Q96DX5 294 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ZBED6CLQ96FA7 236 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CHMP1AQ9HD42 196 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 FAM120CQ9NX05 1096 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ZSCAN32Q9NX65 697 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 LINC00854A0A1B0GVQ3 168 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 NOTOA8MTQ0 251 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CST1P01037 141 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ATXN1LP0C7T5 689 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CDKN2DP55273 166 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ALDH6A1Q02252 535 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 PTPRCAPQ14761 206 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 PCBP2Q15366 365 aaKnown RBP eCLIP11.85□□□□□ -0.512e-10■■□□□ 14.5
SMAD9-201ENST00000350148 LPCAT4Q643R3 524 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 HACD2Q6Y1H2 254 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 TMCO2Q7Z6W1 182 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 SVOPLQ8N434 492 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 CLDN19Q8N6F1 224 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 PDLIM5Q96HC4 596 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 DUSP26Q9BV47 211 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms