RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 IRF8Q02556 426 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 PWP1Q13610 501 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 DOC2AQ14183 400 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ADGRE1Q14246 886 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 CAPRIN1Q14444 709 aaKnown RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 IMPG1Q17R60 797 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 MUM1Q2TAK8 710 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TIGD2Q4W5G0 525 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TMEM259Q4ZIN3 620 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SLC44A4Q53GD3 710 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SGO1Q5FBB7 561 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TMEM196Q5HYL7 178 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 CACHD1Q5VU97 1274 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 NANOGP8Q6NSW7 305 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 KIAA1211LQ6NV74 962 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SLC2A7Q6PXP3 512 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 FAM83HQ6ZRV2 1179 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 HEATR4Q86WZ0 1026 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 PDSS2Q86YH6 399 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TRAPPC5Q8IUR0 188 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 AQP12AQ8IXF9 295 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 RIMKLAQ8IXN7 391 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 CFAP206Q8IYR0 622 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 CHPFQ8IZ52 775 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 FAM9CQ8IZT9 166 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 LILRA2Q8N149 483 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 LIX1Q8N485 282 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 HDDC3Q8N4P3 179 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TMEM102Q8N9M5 508 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TP53I13Q8NBR0 393 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SMRP1Q8NCR6 262 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ADCY4Q8NFM4 1077 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 OR8J3Q8NGG0 315 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 OR9A1PQ8NGU1 263 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF480Q8WV37 535 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SLC13A3Q8WWT9 602 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ASB12Q8WXK4 309 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SLCO4A1Q96BD0 722 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TESCQ96BS2 214 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 RSRC1Q96IZ7 334 aaKnown RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TMEM74Q96NL1 305 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 NECTIN4Q96NY8 510 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ZBTB18Q99592 522 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF184Q99676 751 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ECSITQ9BQ95 431 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 EHD1Q9H4M9 534 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ELOVL6Q9H5J4 265 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 NANOGQ9H9S0 305 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 IL1RL2Q9HB29 575 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ITM2CQ9NQX7 267 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SPATA6Q9NWH7 488 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SIRT5Q9NXA8 310 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SLAMF8Q9P0V8 285 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ACTR3BQ9P1U1 418 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 MAN2B2Q9Y2E5 1009 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 DLGAP4Q9Y2H0 992 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 LRCH1Q9Y2L9 728 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TMEM98Q9Y2Y6 226 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF292O60281 2723 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ASH1LQ9NR48 2969 aaKnown RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 PIKFYVEQ9Y2I7 2098 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 A0A1W2PP55 124 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 A0A1W2PQF6 199 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 TCRBV5S2A0A599 114 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 E7EQ34 232 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CLGNO14967 610 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PLRG1O43660 514 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PRMT3O60678 531 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 DNAJA2O60884 412 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 ADAM23O75077 832 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 RNASEH2AO75792 299 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PCCBP05166 539 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 RPSAP08865 295 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 NPPBP16860 134 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 SDC1P18827 310 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 ATP6V1B2P21281 511 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PEX2P28328 305 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MAPK1P28482 360 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 HTR1EP28566 365 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 TIE1P35590 1138 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 HALP42357 657 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 DGKQP52824 942 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CLNS1AP54105 237 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PHC1P78364 1004 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 TAP2Q03519 686 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 LIPEQ05469 1076 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 DMPKQ09013 629 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MTAPQ13126 283 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 NFE2L1Q14494 772 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PTGR1Q14914 329 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 IRF4Q15306 451 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 AAK1Q2M2I8 961 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MAP7D1Q3KQU3 841 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 SFT2D3Q587I9 215 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 XKR6Q5GH73 641 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 RABL3Q5HYI8 236 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms